RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 KLF16Q9BXK1 252 aaPredicted RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 FBXO4Q9UKT5 387 aa16.06■□□□□ 0.16
PRKN-201ENST00000338468 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRKN-201ENST00000338468 TPRP12270 2363 aaKnown RBP16.06■□□□□ 0.16
PRKN-201ENST00000338468 BECN2A8MW95 431 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
PRKN-201ENST00000338468 MDM4O15151 490 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 MBD3O95983 291 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 CYP17A1P05093 508 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 RARGP13631 454 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 PLA2G4AP47712 749 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 TKTL1P51854 596 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 VWA3BQ502W6 1294 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 MAMSTRQ6ZN01 415 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 Q6ZS52 159 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 DDX42Q86XP3 938 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRKN-201ENST00000338468 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
PRKN-201ENST00000338468 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 EZH1Q92800 747 aaPredicted RBP16.05■□□□□ 0.16
PRKN-201ENST00000338468 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 ULBP1Q9BZM6 244 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 NDST4Q9H3R1 872 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 ACP6Q9NPH0 428 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 CLIC5Q9NZA1 410 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 TMEM63CQ9P1W3 806 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 HESX1Q9UBX0 185 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 NAGPAQ9UK23 515 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 PCDHGA2Q9Y5H1 932 aa16.05■□□□□ 0.16
PRKN-201ENST00000338468 ACACBO00763 2458 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 KCNJ18B7U540 433 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 SETSIPP0DME0 302 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 GALK1P51570 392 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 SLC8A3P57103 927 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 KCNMA1Q12791 1236 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 KCNJ12Q14500 433 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 CCDC183Q5T5S1 534 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 CDKAL1Q5VV42 579 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 PMF1Q6P1K2 205 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 RHBDF2Q6PJF5 856 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 KCTD13Q8WZ19 329 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 PRMT8Q9NR22 394 aaPredicted RBP16.04■□□□□ 0.16
PRKN-201ENST00000338468 C2orf42Q9NWW7 574 aa16.04■□□□□ 0.16
PRKN-201ENST00000338468 NFATC1O95644 943 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 ZBED1O96006 694 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 EGFP01133 1207 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 IRF1P10914 325 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 TDGF1P13385 188 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 KRT5P13647 590 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
PRKN-201ENST00000338468 ATP5C1P36542 298 aaKnown RBP16.03■□□□□ 0.16
PRKN-201ENST00000338468 OPRD1P41143 372 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 PSEN1P49768 467 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 CSTF1Q05048 431 aaKnown RBP16.03■□□□□ 0.16
PRKN-201ENST00000338468 ADIGQ0VDE8 80 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 LRRC32Q14392 662 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 DHCR24Q15392 516 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 HTR3DQ70Z44 454 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 ENOSF1Q7L5Y1 443 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 BBS7Q8IWZ6 715 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 SHC3Q92529 594 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 IER2Q9BTL4 223 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 NACA2Q9H009 215 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 DNMT3LQ9UJW3 386 aa16.03■□□□□ 0.16
PRKN-201ENST00000338468 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
PRKN-201ENST00000338468 KMT2BQ9UMN6 2715 aaPredicted RBP16.03■□□□□ 0.16
PRKN-201ENST00000338468 M0QYV0 167 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.16
PRKN-201ENST00000338468 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.16
PRKN-201ENST00000338468 RPL34P49207 117 aaKnown RBP16.02■□□□□ 0.16
PRKN-201ENST00000338468 RGS7P49802 495 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 MFAP3P55082 362 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRKN-201ENST00000338468 LMNB2Q03252 620 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 MESP2Q0VG99 397 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 STILQ15468 1287 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 C10orf120Q5SQS8 335 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 DENND1BQ6P3S1 775 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 PKN3Q6P5Z2 889 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 TSSK4Q6SA08 328 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 NELL1Q92832 810 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 P2RY13Q9BPV8 354 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 LRRC4Q9HBW1 653 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 ANO10Q9NW15 660 aa16.02■□□□□ 0.16
PRKN-201ENST00000338468 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms