RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 AFF4Q9UHB7 1163 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LAMA2P24043 3122 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SYNJ2BP-COX16A0A087WUM0 186 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GRXCR1A8MXD5 290 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 M0QYT0 321 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ABLIM3O94929 683 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MYOGP15173 224 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CTNNB1P35222 781 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 BMPR1AP36894 532 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MAGEA10P43363 369 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 YWHAGP61981 247 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RPL10AP62906 217 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CLUL1Q15846 466 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MFSD7Q6UXD7 560 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DENND5BQ6ZUT9 1274 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MMGT1Q8N4V1 131 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HERPUD2Q9BSE4 406 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FBXO44Q9H4M3 255 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 COX16Q9P0S2 106 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 STK39Q9UEW8 545 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NR2E3Q9Y5X4 410 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PLXNA3P51805 1871 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GBF1Q92538 1859 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 LINC01553A4QN01 128 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FSCN2O14926 492 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SEC24AO95486 1093 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RHOXF2BP0C7M4 288 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CTSAP10619 480 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RALAP11233 206 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CETN2P41208 172 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PGFP49763 221 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TUBB4BP68371 445 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MTMR3Q13615 1198 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RAB33AQ14088 237 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SHHQ15465 462 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPOCD1Q6ZMY3 1216 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KLHL7Q8IXQ5 586 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CMASQ8NFW8 434 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SLC7A14Q8TBB6 771 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ADAM32Q8TC27 787 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GIPC2Q8TF65 315 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPATA17Q96L03 361 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RHOXF2Q9BQY4 288 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 OSBPL8Q9BZF1 889 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SCML2Q9UQR0 700 aa15.39■□□□□ 0.05
CDK5RAP3-201ENST00000338399 A0A1W2PQH9 124 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 LILRB3O75022 631 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ENDOD1O94919 500 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ATF2P15336 505 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ATF6P18850 670 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KDELR1P24390 212 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 YWHAQP27348 245 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TUFMP49411 452 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 NME3Q13232 169 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 BOLA3Q53S33 107 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 BTBD8Q5XKL5 378 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TPGS2Q68CL5 300 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM109BQ6ICB4 259 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 BNIPLQ7Z465 357 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SCD5Q86SK9 330 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KCTD6Q8NC69 237 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KRT12Q99456 494 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SNRNP25Q9BV90 132 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 NMUR1Q9HB89 426 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CYP4F11Q9HBI6 524 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GPATCH2LQ9NWQ4 482 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 IL37Q9NZH6 218 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
CDK5RAP3-201ENST00000338399 C3orf70A6NLC5 250 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CCDC188H7C350 402 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TEX28O15482 410 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ARHGEF15O94989 841 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CD48P09326 243 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KRT10P13645 584 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 COPS2P61201 443 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MRPS25P82663 173 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DEUP1Q05D60 604 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ZC3H12AQ5D1E8 599 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KAZNQ674X7 775 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TMC7Q7Z402 723 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPRED2Q7Z698 418 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM131BQ86XD5 332 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GPR65Q8IYL9 337 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DDX47Q9H0S4 455 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RXFP1Q9HBX9 757 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ABCC13Q9NSE7 274 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RRN3Q9NYV6 651 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SSX2IPQ9Y2D8 614 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms