RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SLITRK3O94933 977 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 PROCP04070 461 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 ITGAXP20702 1163 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 DCKP27707 260 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 CRHR1P34998 444 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 STT3AP46977 705 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 VAMP7P51809 220 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 ARL13BQ3SXY8 428 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 LIN9Q5TKA1 542 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 NEK10Q6ZWH5 1172 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SETD3Q86TU7 594 aaPredicted RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 NUDCD3Q8IVD9 361 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 ARHGEF19Q8IW93 802 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
SKA2-201ENST00000330137 TNIP2Q8NFZ5 429 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 PPP4R1Q8TF05 950 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 CRYGNQ8WXF5 182 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 TOP1MTQ969P6 601 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 ISOC1Q96CN7 298 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 TUBA1CQ9BQE3 449 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 PDZD7Q9H5P4 517 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 APPL1Q9UKG1 709 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 DDX60LQ5H9U9 1706 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 AREL1O15033 823 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
SKA2-201ENST00000330137 BPGMP07738 259 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 CNTFP26441 200 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 CCR3P51677 355 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 NLRP11P59045 1033 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 PSMD6Q15008 389 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SLC27A3Q5K4L6 730 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 MFSD4BQ5TF39 518 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 RINT1Q6NUQ1 792 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 IYDQ6PHW0 289 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 IQCF2Q8IXL9 164 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 PPM1KQ8N3J5 372 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 RMND5BQ96G75 393 aaPredicted RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 SERAC1Q96JX3 654 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 NSMCE3Q96MG7 304 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 EYA3Q99504 573 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 C1orf50Q9BV19 199 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 PAIP1Q9H074 479 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 C8orf4Q9NR00 106 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 RAB20Q9NX57 234 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 DDX56Q9NY93 547 aaKnown RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 RGPD3A6NKT7 1758 aaPredicted RBP8.68□□□□□ -1.02
SKA2-201ENST00000330137 RGPD4Q7Z3J3 1758 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 SRCAPQ6ZRS2 3230 aa8.68□□□□□ -1.02
SKA2-201ENST00000330137 GPR25O00155 361 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SNAP23O00161 211 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 FUCA1P04066 466 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PABPC1P11940 636 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 GRK2P25098 689 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 GYG1P46976 350 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 EIF2B2P49770 351 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 GPC3P51654 580 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 GRSF1Q12849 480 aaKnown RBP eCLIP8.67□□□□□ -1.02
SKA2-201ENST00000330137 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TIFABQ6ZNK6 161 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 C1orf186Q6ZWK4 172 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 EEPD1Q7L9B9 569 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 DEFB107AQ8IZN7 70 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TBC1D15Q8TC07 691 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 KBTBD7Q8WVZ9 684 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 DUS3LQ96G46 650 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 FIZ1Q96SL8 496 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 ANKRD60Q9BZ19 345 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SMYD3Q9H7B4 428 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PSTPIP2Q9H939 334 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 MOV10Q9HCE1 1003 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 DNPEPQ9ULA0 475 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 EMSYQ7Z589 1322 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TAF1LQ8IZX4 1826 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TRIM49P0CI25 452 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TRIM49CP0CI26 452 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 CYP19A1P11511 503 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.024e-8■□□□□ 8.4
SKA2-201ENST00000330137 CIITAP33076 1130 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 GSSP48637 474 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 HK2P52789 917 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 EPHB1P54762 984 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 RFTN1Q14699 578 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 CHI3L2Q15782 390 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 GPATCH4Q5T3I0 446 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 FAXCQ5TGI0 409 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 ZNF746Q6NUN9 644 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 AMIGO2Q86SJ2 522 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 MYCT1Q8N699 235 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms