RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 G3BP2Q9UN86 482 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CCDC195A0A1B0GUA6 201 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TMEM88BA6NKF7 163 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 IL10P22301 178 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CYP2F1P24903 491 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 MAPK8P45983 427 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TATDN2Q93075 761 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 NAA20P61599 178 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 KYNUQ16719 465 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 LATS2Q9NRM7 1088 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 PKD2L2Q9NZM6 624 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ASTN1O14525 1302 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 SF3B1O75533 1304 aaKnown RBP eCLIP11.79□□□□□ -0.529e-6■■■■■ 68.9
COL4A5-201ENST00000328300 GHRP10912 638 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 EFEMP1Q12805 493 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 KDM7AQ6ZMT4 941 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 TTC30AQ86WT1 665 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 DACT3Q96B18 629 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ABCF3Q9NUQ8 709 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 SNCAIPQ9Y6H5 919 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 FARP2O94887 1054 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ATP5BP06576 529 aaKnown RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 PDCD2Q16342 344 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ABHD15Q6UXT9 468 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 HELQQ8TDG4 1101 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 SLC26A7Q8TE54 656 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 E2F7Q96AV8 911 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 CD274Q9NZQ7 290 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 NR2E3Q9Y5X4 410 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 PHF20L1A8MW92 1017 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 CDH17Q12864 832 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 LONRF1Q17RB8 773 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ST13P4Q8IZP2 240 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 VPS37AQ8NEZ2 397 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 GID8Q9NWU2 228 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ANKRD63C9JTQ0 380 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 RECQL4O94761 1208 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 CYP1A2P05177 515 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 NOS2P35228 1153 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 RHOAP61586 193 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 CAPSQ13938 189 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ZRANB3Q5FWF4 1079 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ANGPTL8Q6UXH0 198 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 SLC26A11Q86WA9 606 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 ZNF558Q96NG5 402 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 MRPL46Q9H2W6 279 aaKnown RBP11.79□□□□□ -0.52
COL4A5-201ENST00000328300 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
COL4A5-201ENST00000328300 HNRNPH3P31942 346 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 HIC1Q14526 733 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ZNF284Q2VY69 593 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 TMC7Q7Z402 723 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 PHF13Q86YI8 300 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SLC25A41Q8N5S1 370 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 PIP4K2CQ8TBX8 421 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 OR6C75A6NL08 312 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 MPOP05164 745 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 TMED1Q13445 227 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 PCSK7Q16549 785 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 AASDHQ4L235 1098 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 DSG4Q86SJ6 1040 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 LENG9Q96B70 501 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SIKE1Q9BRV8 207 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 MRPL1Q9BYD6 325 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 F5H423 210 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 APOC4-APOC2K7ER74 178 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 TM9SF1O15321 606 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 HNRNPRO43390 633 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 APOC2P02655 101 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ITGB5P18084 799 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CDK16Q00536 496 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ANO5Q75V66 913 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CASKIN2Q8WXE0 1202 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CASS4Q9NQ75 786 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CLUHO75153 1309 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ZBTB22O15209 634 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CYP3A5P20815 502 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 GRK2P25098 689 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 HSD17B3P37058 310 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 MGAT5Q09328 741 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms