RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 EIF4BP23588 611 aaKnown RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 NR1H2P55055 460 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 ADRM1Q16186 407 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 LMBRD2Q68DH5 695 aaPredicted RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 Q6ZNX1 250 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 ARCQ7LC44 396 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 MAVSQ7Z434 540 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 FAM71DQ8N9W8 422 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 PIWIL2Q8TC59 973 aaKnown RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 CFAP36Q96G28 342 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 RIT2Q99578 217 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 FRMD8P1Q9BZ68 369 aaPredicted RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 STN1Q9H668 368 aaKnown RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 NRDE2Q9H7Z3 1164 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 UGT1A7Q9HAW7 530 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 UGT1A10Q9HAW8 530 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 UGT1A8Q9HAW9 530 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 PLAC1Q9HBJ0 212 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 POLLQ9UGP5 575 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 DNAJC16Q9Y2G8 782 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 AK5Q9Y6K8 562 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 TOP3BO95985 862 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 GSRP00390 522 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 HLA-DRAP01903 254 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 HDAC4P56524 1084 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 COG7P83436 770 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 KCNJ11Q14654 390 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 FRMD7Q6ZUT3 714 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 USP37Q86T82 979 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 WDR75Q8IWA0 830 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 SMYD1Q8NB12 490 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 TMOD2Q9NZR1 351 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 PAIP2BQ9ULR5 123 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 APOBEC2Q9Y235 224 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 EFR3BQ9Y2G0 817 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 WDR37Q9Y2I8 494 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 PCDHB4Q9Y5E5 795 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 FAM189A1O60320 539 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 CRHR1P34998 444 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 SLC44A4Q53GD3 710 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 TEDDM1Q5T9Z0 273 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 ERI1Q8IV48 349 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 APOBEC3GQ9HC16 384 aaKnown RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 AGTPBP1Q9UPW5 1226 aa13.24□□□□□ -0.29
CCDC60-201ENST00000327554 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
CCDC60-201ENST00000327554 A0A1B0GTW7 788 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 HMX2A2RU54 273 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 FAM58BPP0C7Q3 252 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 RBP3P10745 1247 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 CDKL1Q00532 357 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SPP2Q13103 211 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 CUL2Q13617 745 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 TAZQ16635 292 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 MBLAC2Q68D91 279 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 AMIGO2Q86SJ2 522 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ADGRF2Q8IZF7 708 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 GPD1LQ8N335 351 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 RSPH1Q8WYR4 309 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SLC2A11Q9BYW1 496 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 RIMS3Q9UJD0 308 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 TOM1L1O75674 476 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ZMPSTE24O75844 475 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 FUT4P22083 530 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 PRKCHP24723 683 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 NPTX2P47972 431 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 IDH3AP50213 366 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SCNN1DP51172 638 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 YWHAZP63104 245 aaKnown RBP13.23□□□□□ -0.29
CCDC60-201ENST00000327554 CBLBQ13191 982 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-201ENST00000327554 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ZACNQ401N2 412 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 C6orf52Q5T4I8 152 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 DNAJC24Q6P3W2 148 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 DCUN1D2Q6PH85 259 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 DHRS4L2Q6PKH6 230 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-201ENST00000327554 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 RSPH3Q86UC2 560 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms