RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SIX6OS1Q8N1H7 587 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 CCDC26Q8TAB7 109 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 SCAMP5Q8TAC9 235 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 NDRG1Q92597 394 aaKnown RBP19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 ULBP1Q9BZM6 244 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 CYP4F11Q9HBI6 524 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 GDF3Q9NR23 364 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 OGFRQ9NZT2 677 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 PLXNA3P51805 1871 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 RAD51CO43502 376 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 TGM5O43548 720 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 ZMYND10O75800 440 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 HEXIM1O94992 359 aaKnown RBP19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 ATF6P18850 670 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 KLRC2P26717 231 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC5A3P53794 718 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 SNX16P57768 344 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 FAM102AQ5T9C2 384 aaPredicted RBP19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 MAATS1Q7Z4T9 603 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 RHOT1Q8IXI2 618 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 ATG2AQ2TAZ0 1938 aa19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 COL4A4P53420 1690 aaPredicted RBP19.63■□□□□ 0.73
EXOSC3-201ENST00000327304 RFXAPO00287 272 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 MAP2K7O14733 419 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 LPXNO60711 386 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 TAF5Q15542 800 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 DCUN1D2Q6PH85 259 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 LILRA6Q6PI73 481 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 NIPA2Q8N8Q9 360 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 EIF1ADQ8N9N8 165 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 METTL5Q9NRN9 209 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 COLQQ9Y215 455 aaPredicted RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 YIPF1Q9Y548 306 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 TRIOBPQ9H2D6 2365 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 SIGLEC16A6NMB1 481 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 PRRG1O14668 218 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 GLI1P08151 1106 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 TUFMP49411 452 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 RPL7AP62424 266 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 RPL10AP62906 217 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC6A3Q01959 620 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 IFRD2Q12894 506 aaPredicted RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 PIGHQ14442 188 aaPredicted RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC13A5Q86YT5 568 aaPredicted RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 TCEAL8Q8IYN2 117 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 JOSD2Q8TAC2 188 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 GIPC2Q8TF65 315 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 MCEEQ96PE7 176 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 DDX47Q9H0S4 455 aaKnown RBP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 HSFX1Q9UBD0 423 aa19.62■□□□□ 0.73
EXOSC3-201ENST00000327304 BHMG1C9JSJ3 638 aaPredicted RBP19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 GRAP2O75791 330 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 ELF1P32519 619 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 USP46P62068 366 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 PDE12Q6L8Q7 609 aaKnown RBP19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 ZDHHC17Q8IUH5 632 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 FNIP1Q8TF40 1166 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 KHSRPQ92945 711 aaKnown RBP eCLIP19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 SPATA17Q96L03 361 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 FBXW11Q9UKB1 542 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 USP3Q9Y6I4 520 aa19.61■□□□□ 0.73
EXOSC3-201ENST00000327304 SASH3O75995 380 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 FBXO21O94952 628 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 ZBED1O96006 694 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 GLUD1P00367 558 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 KRT3P12035 628 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 DAOAP59103 153 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MRPS25P82663 173 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MRPS5P82675 430 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 GUCY2DQ02846 1103 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MTMR3Q13615 1198 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 LRRC38Q5VT99 294 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 AADACL2Q6P093 401 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 BHLHA9Q7RTU4 235 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 ADGRD2Q7Z7M1 963 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 KATNAL2Q8IYT4 538 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 NUP93Q8N1F7 819 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 AENQ8WTP8 325 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MAIP1Q8WWC4 291 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 LMAN2LQ9H0V9 348 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 EPB41L5Q9HCM4 733 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 CNGB3Q9NQW8 809 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MAFFQ9ULX9 164 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 INSL5Q9Y5Q6 135 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 CLASP2O75122 1294 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 MYBL2P10244 700 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 RFC1P35251 1148 aaPredicted RBP19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 CLCN4P51793 760 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 CYP1B1Q16678 543 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 LRIT3Q3SXY7 679 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC26A9Q7LBE3 791 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 EMC1Q8N766 993 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 NR2E1Q9Y466 385 aa19.6■□□□□ 0.73
EXOSC3-201ENST00000327304 CDH23Q9H251 3354 aa19.59■□□□□ 0.73
EXOSC3-201ENST00000327304 A0A1W2PPC1 479 aa19.59■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC38A8A6NNN8 435 aa19.59■□□□□ 0.73
EXOSC3-201ENST00000327304 PER2O15055 1255 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms