RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TAZQ16635 292 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 CA9Q16790 459 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 EFHC1Q5JVL4 640 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 MFSD5Q6N075 450 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 LRRC43Q8N309 656 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 SCAMP5Q8TAC9 235 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 HSPH1Q92598 858 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 ZNF689Q96CS4 500 aaPredicted RBP16.44■□□□□ 0.22
CALR-201ENST00000316448 TXLNGYQ9BZA5 131 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 HOMER3Q9NSC5 361 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
CALR-201ENST00000316448 VPS18Q9P253 973 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 ABHD14A-ACY1A0A1B0GW23 586 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 TBC1D4O60343 1298 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 CAPN15O75808 1086 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 ENDOD1O94919 500 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 VNN2O95498 520 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 KRT7P08729 469 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 MATKP42679 507 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 GPR15P49685 360 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 COPS2P61201 443 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 YWHAZP63104 245 aaKnown RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 UAP1Q16222 522 aaPredicted RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 ZC3H12AQ5D1E8 599 aaKnown RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 SPATA2LQ8IUW3 424 aaPredicted RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 SIX6OS1Q8N1H7 587 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 TTC9BQ8N6N2 239 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 STKLD1Q8NE28 680 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 SLC2A13Q96QE2 648 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 FAM129AQ9BZQ8 928 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 MCOLN1Q9GZU1 580 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 RC3H2Q9HBD1 1191 aaKnown RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 PTPRDP23468 1912 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 LTBP2Q14767 1821 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 HSD17B3P37058 310 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 PGFP49763 221 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 MMRN1Q13201 1228 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 CCNG2Q16589 344 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 SDHAF4Q5VUM1 108 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 SYDE1Q6ZW31 735 aaPredicted RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 BNIPLQ7Z465 357 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 NT5C3BQ969T7 300 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 PGLYRP2Q96PD5 576 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 DMAP1Q9NPF5 467 aaPredicted RBP16.43■□□□□ 0.22
CALR-201ENST00000316448 SNX24Q9Y343 169 aa16.43■□□□□ 0.22
CALR-201ENST00000316448 TNFRSF10BO14763 440 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 PPFIA2O75334 1257 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 DAB1O75553 588 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 CETN2P41208 172 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
CALR-201ENST00000316448 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 PM20D1Q6GTS8 502 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 PRSS55Q6UWB4 352 aaPredicted RBP16.42■□□□□ 0.22
CALR-201ENST00000316448 ATAD1Q8NBU5 361 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 GRK7Q8WTQ7 553 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 RUFY1Q96T51 708 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 NPY6RQ99463 290 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 CNGB3Q9NQW8 809 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 ABI2Q9NYB9 513 aaPredicted RBP16.42■□□□□ 0.22
CALR-201ENST00000316448 ADAM21Q9UKJ8 722 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 USP3Q9Y6I4 520 aa16.42■□□□□ 0.22
CALR-201ENST00000316448 ADAM12O43184 909 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 OPA1O60313 960 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 ZBED1O96006 694 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 IL4RP24394 825 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 GYS2P54840 703 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 KRT17Q04695 432 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 PTK6Q13882 451 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 TFDP3Q5H9I0 405 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 KCTD6Q8NC69 237 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
CALR-201ENST00000316448 CRISPLD1Q9H336 500 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 SF3B1O75533 1304 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■■■■ 33.5
CALR-201ENST00000316448 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 H0YGN5 161 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 FBXO21O94952 628 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 NOS2P35228 1153 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 GRIK1P39086 918 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 SULT1E1P49888 294 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 ARPP19P56211 112 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 DDR2Q16832 855 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 LRIG3Q6UXM1 1119 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 C4orf50Q6ZRC1 276 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 OTOP2Q7RTS6 562 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 SCN4BQ8IWT1 228 aa16.41■□□□□ 0.22
CALR-201ENST00000316448 RNF168Q8IYW5 571 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms