RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ARL8BQ9NVJ2 186 aa9.64□□□□□ -0.87
BDNF-201ENST00000314915 EVLQ9UI08 416 aaPredicted RBP9.64□□□□□ -0.87
BDNF-201ENST00000314915 CAPN8A6NHC0 703 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 KCNK3O14649 394 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 PALMO75781 387 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 GHRHRQ02643 423 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 GALNT3Q14435 633 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 PRR23BQ6ZRT6 265 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 IGFN1Q86VF2 1251 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CCDC116Q8IYX3 515 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SLC15A4Q8N697 577 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 OR8K3Q8NH51 312 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ZNF347Q96SE7 839 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 RMDN3Q96TC7 470 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 MCMBPQ9BTE3 642 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TRIM39Q9HCM9 518 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 DIMT1Q9UNQ2 313 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 PLAGL2Q9UPG8 496 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 EIF3LQ9Y262 564 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 MYH10P35580 1976 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
BDNF-201ENST00000314915 MEI4A8MW99 385 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SRGNP10124 158 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 MUTP22033 750 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 PEX2P28328 305 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 DNA2P51530 1060 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 EHHADHQ08426 723 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CDK10Q15131 360 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 AMIGO2Q86SJ2 522 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 HPS6Q86YV9 775 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 OR5H6Q8NGV6 325 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SPATA18Q8TC71 538 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 IPCEF1Q8WWN9 437 aaPredicted RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 NELL1Q92832 810 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 MTMR8Q96EF0 704 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 WDR12Q9GZL7 423 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SP110Q9HB58 689 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 HMG20AQ9NP66 347 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ACTR3BQ9P1U1 418 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 AMACRQ9UHK6 382 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 PCDHA4Q9UN74 947 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 AP4B1Q9Y6B7 739 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 I3L4J1 428 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 BUB1O43683 1085 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 NPPAP01160 153 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 CDK16Q00536 496 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CACHD1Q5VU97 1274 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SLFN11Q7Z7L1 901 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ZNF34Q8IZ26 560 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ZNF507Q8TCN5 953 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 SSH3Q8TE77 659 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 PIK3R3Q92569 461 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 FAM167AQ96KS9 214 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 PIP5K1AQ99755 562 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 C9orf16Q9BUW7 83 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 MLXIPLQ9NP71 852 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ENOPH1Q9UHY7 261 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 HCN4Q9Y3Q4 1203 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TAF5Q15542 800 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 ARSHQ5FYA8 562 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 FAM180BQ6P0A1 224 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 USP37Q86T82 979 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TMEM126BQ8IUX1 230 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 MB21D2Q8IYB1 491 aaPredicted RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 HM13Q8TCT9 377 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
BDNF-201ENST00000314915 ZNF560Q96MR9 790 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TTYH3Q9C0H2 523 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 CASS4Q9NQ75 786 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 TESMINQ9Y4I5 508 aa9.63□□□□□ -0.87
BDNF-201ENST00000314915 WNK3Q9BYP7 1800 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 GUCY1A2P33402 732 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 GP5P40197 560 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 HIRAP54198 1017 aaPredicted RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 LRRC74AQ0VAA2 488 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 LRIT3Q3SXY7 679 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 ESCO2Q56NI9 601 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 RARS2Q5T160 578 aaKnown RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 RSBN1Q5VWQ0 802 aaPredicted RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 RFX8Q6ZV50 586 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 PALM2Q8IXS6 379 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 ULK2Q8IYT8 1036 aa9.62□□□□□ -0.87
BDNF-201ENST00000314915 VANGL1Q8TAA9 524 aaPredicted RBP9.62□□□□□ -0.87
BDNF-201ENST00000314915 FIG4Q92562 907 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms