RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PDK1Q15118 436 aa18.71■□□□□ 0.59
SPSB4-201ENST00000310546 OGFRL1Q5TC84 451 aaPredicted RBP18.71■□□□□ 0.59
SPSB4-201ENST00000310546 IGDCC3Q8IVU1 814 aa18.71■□□□□ 0.59
SPSB4-201ENST00000310546 PEX1O43933 1283 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 ENTPD1P49961 510 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 NR1H2P55055 460 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 OASLQ15646 514 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 KRT39Q6A163 491 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SH2D5Q6ZV89 423 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 POMGNT1Q8WZA1 660 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 TBCCD1Q9NVR7 557 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RRN3Q9NYV6 651 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SNCAIPQ9Y6H5 919 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SDR42E2A6NKP2 422 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 CASQ2O14958 399 aaPredicted RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RBP3P10745 1247 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 HOXD12P35452 270 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 MAMLD1Q13495 774 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 OTOP1Q7RTM1 612 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 PQLC1Q8N2U9 271 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RSPH1Q8WYR4 309 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 MKL1Q969V6 931 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 NYAP2Q9P242 653 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RSL24D1Q9UHA3 163 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 IVNS1ABPQ9Y6Y0 642 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 ARHGEF35A5YM69 484 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 CD48P09326 243 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 FAM58BPP0C7Q3 252 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 ELK3P41970 407 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RPL26P61254 145 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 BASP1P80723 227 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 TMEM179Q6ZVK1 233 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 RCOR2Q8IZ40 523 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 DAW1Q8N136 415 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 PPP1R14CQ8TAE6 165 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 MMP19Q99542 508 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SENP7Q9BQF6 1050 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SH2D3AQ9BRG2 576 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 XPO7Q9UIA9 1087 aaKnown RBP18.7■□□□□ 0.58
SPSB4-201ENST00000310546 PLLPQ9Y342 182 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
SPSB4-201ENST00000310546 SF3B1O75533 1304 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPSB4-201ENST00000310546 NFASCO94856 1347 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 MYPNQ86TC9 1320 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 SH3PXD2BA1X283 911 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TMEM247A6NEH6 219 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TMEM63AO94886 807 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 CFHP08603 1231 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 COL6A2P12110 1019 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 DSG3P32926 999 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 CIITAP33076 1130 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 SPDYE2Q495Y8 402 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 LIN9Q5TKA1 542 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 RSPH3Q86UC2 560 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 AHI1Q8N157 1196 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TRIML2Q8N7C3 387 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 PPM1NQ8N819 430 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 SLC44A1Q8WWI5 657 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TMIGD2Q96BF3 282 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 LRGUKQ96M69 825 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 PSME4Q14997 1843 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 SREBF1P36956 1147 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 RPL7AP62424 266 aaKnown RBP18.69■□□□□ 0.58
SPSB4-201ENST00000310546 PGM2L1Q6PCE3 622 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 Q6ZNX1 250 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 PCGF5Q86SE9 256 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 ACTRT2Q8TDY3 377 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 DDI1Q8WTU0 396 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 TRIM11Q96F44 468 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 ZNF696Q9H7X3 374 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 GNEQ9Y223 722 aaKnown RBP18.69■□□□□ 0.58
SPSB4-201ENST00000310546 APOBEC2Q9Y235 224 aaKnown RBP18.69■□□□□ 0.58
SPSB4-201ENST00000310546 SSX2IPQ9Y2D8 614 aa18.69■□□□□ 0.58
SPSB4-201ENST00000310546 ZNFX1Q9P2E3 1918 aaKnown RBP18.69■□□□□ 0.58
SPSB4-201ENST00000310546 KBTBD13C9JR72 458 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 XPO1O14980 1071 aaKnown RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 ENTPD3O75355 529 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 TOM1L1O75674 476 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 PSMC5P62195 406 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 ANKDD1AQ495B1 522 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 RARS2Q5T160 578 aaKnown RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 TXNRD3NBQ6F5E7 133 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 DRICH1Q6PGQ1 229 aaPredicted RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 SLC15A3Q8IY34 581 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 CPXCR1Q8N123 301 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 NACC1Q96RE7 527 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 BRD8Q9H0E9 1235 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 TMEM206Q9H813 350 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 IFT122Q9HBG6 1241 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 XPNPEP1Q9NQW7 623 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 PLK2Q9NYY3 685 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 DRG1Q9Y295 367 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms