RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ZBED1O96006 694 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 MYL3P08590 195 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 LCP1P13796 627 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 KCNE1P15382 129 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 RBL1P28749 1068 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 RPA3P35244 121 aaPredicted RBP20.8■□□□□ 0.92
CXCL16-201ENST00000293778 ELK3P41970 407 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 TAF6P49848 677 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 ZNF200P98182 395 aaPredicted RBP20.8■□□□□ 0.92
CXCL16-201ENST00000293778 MTFR1Q15390 333 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 SYCP2LQ5T4T6 812 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 APPL2Q8NEU8 664 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 DNAI2Q9GZS0 605 aa20.8■□□□□ 0.92
CXCL16-201ENST00000293778 PDCD11Q14690 1871 aaKnown RBP20.79■□□□□ 0.92
CXCL16-201ENST00000293778 BCLAF3A2AJT9 711 aaKnown RBP20.79■□□□□ 0.92
CXCL16-201ENST00000293778 DCAF8L1A6NGE4 600 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 ZNF487B1APH4 448 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 TYROBPO43914 113 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 SCNN1AP37088 669 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 MSH2P43246 934 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 XKR4Q5GH76 650 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 ZNF618Q5T7W0 954 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 CGB2Q6NT52 195 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 IGDCC3Q8IVU1 814 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 CENPIQ92674 756 aaPredicted RBP20.79■□□□□ 0.92
CXCL16-201ENST00000293778 TSPAN18Q96SJ8 248 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 PLCD4Q9BRC7 762 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 C11orf84Q9BUA3 381 aaPredicted RBP20.79■□□□□ 0.92
CXCL16-201ENST00000293778 GOLGA2P5Q9HBQ8 144 aa20.79■□□□□ 0.92
CXCL16-201ENST00000293778 RASSF9O75901 435 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 PIAS1O75925 651 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 KRT4P19013 534 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 CYP2F1P24903 491 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 RPL34P49207 117 aaKnown RBP20.78■□□□□ 0.92
CXCL16-201ENST00000293778 CPT1AP50416 773 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 SOX4Q06945 474 aaPredicted RBP20.78■□□□□ 0.92
CXCL16-201ENST00000293778 SV2CQ496J9 727 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 SLC2A14Q8TDB8 520 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 GRAMD1AQ96CP6 724 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 CYTH2Q99418 400 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 PITPNM3Q9BZ71 974 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 DHX35Q9H5Z1 703 aaKnown RBP20.78■□□□□ 0.92
CXCL16-201ENST00000293778 NRDE2Q9H7Z3 1164 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 SSU72Q9NP77 194 aaKnown RBP20.78■□□□□ 0.92
CXCL16-201ENST00000293778 CYLDQ9NQC7 956 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 HAUS2Q9NVX0 235 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.78■□□□□ 0.925e-7■□□□□ 9.7
CXCL16-201ENST00000293778 PRKAG3Q9UGI9 489 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 TEX264Q9Y6I9 313 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 MAP3K6O95382 1288 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 L1CAMP32004 1257 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 ACADSBP45954 432 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 DPYSL2Q16555 572 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 FAM133BQ5BKY9 247 aaKnown RBP20.78■□□□□ 0.92
CXCL16-201ENST00000293778 FAM182AQ5T1J6 154 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 FAM47EQ6ZV65 393 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 ARCQ7LC44 396 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 DCAKDQ8WVC6 231 aa20.78■□□□□ 0.92
CXCL16-201ENST00000293778 GBP2P32456 591 aaPredicted RBP20.77■□□□□ 0.92
CXCL16-201ENST00000293778 ATXN1P54253 815 aaKnown RBP20.77■□□□□ 0.92
CXCL16-201ENST00000293778 BEX3Q00994 111 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 ADGRF2Q8IZF7 708 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 AP5M1Q9H0R1 490 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 GGT7Q9UJ14 662 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 AP4E1Q9UPM8 1137 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 IPPQ9Y573 584 aa20.77■□□□□ 0.92
CXCL16-201ENST00000293778 KBTBD13C9JR72 458 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 HUS1O60921 280 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 CRYBB1P53674 252 aaPredicted RBP20.77■□□□□ 0.91
CXCL16-201ENST00000293778 XRCC4Q13426 336 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 SLC1A5Q15758 541 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 CCL14Q16627 93 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 PDK4Q16654 411 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 HHATQ5VTY9 493 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 LIMS2Q7Z4I7 341 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 CDKL3Q8IVW4 592 aaPredicted RBP20.77■□□□□ 0.91
CXCL16-201ENST00000293778 HSFY1Q96LI6 401 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 FRMD8Q9BZ67 464 aaPredicted RBP20.77■□□□□ 0.91
CXCL16-201ENST00000293778 KLC2Q9H0B6 622 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 GRID1Q9ULK0 1009 aa20.77■□□□□ 0.91
CXCL16-201ENST00000293778 AVILO75366 819 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 YWHAGP61981 247 aaKnown RBP eCLIP20.76■□□□□ 0.91
CXCL16-201ENST00000293778 DNAJC3Q13217 504 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 RGS9BPQ6ZS82 235 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 MZB1Q8WU39 189 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 TNIP3Q96KP6 325 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 TCRBV9S1A1TA0A576 114 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 C17orf102A2RUQ5 167 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 SPAG6O75602 509 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 UBOX5O94941 541 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 ZWINTO95229 277 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 FAXCQ5TGI0 409 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 ARRDC4Q8NCT1 418 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 SMG8Q8ND04 991 aaKnown RBP20.76■□□□□ 0.91
CXCL16-201ENST00000293778 KLC4Q9NSK0 619 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 ETNK2Q9NVF9 386 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.76■□□□□ 0.91
CXCL16-201ENST00000293778 KLHL14Q9P2G3 628 aa20.76■□□□□ 0.91
CXCL16-201ENST00000293778 ZFXP17010 805 aaPredicted RBP20.75■□□□□ 0.91
CXCL16-201ENST00000293778 YWHAZP63104 245 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms