RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 GRTP1Q5TC63 336 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 STRA8Q7Z7C7 330 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 IFNEQ86WN2 208 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 RFWD2Q8NHY2 731 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 E7ENQ6 273 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 CYTH3O43739 400 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SUPT7LO94864 414 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 NPY2RP49146 381 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 COLGALT1Q8NBJ5 622 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 AENQ8WTP8 325 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 GPATCH2LQ9NWQ4 482 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 NDUFA13Q9P0J0 144 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 CDV3Q9UKY7 258 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 PCDHGC5Q9Y5F6 944 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 EPHX2P34913 555 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TKTL1P51854 596 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MPP3Q13368 585 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 C2CD6Q53TS8 623 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 HERC6Q8IVU3 1022 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 JADE3Q92613 823 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 RMND5AQ9H871 391 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 NCKIPSDQ9NZQ3 722 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MAGEA13PA6NCF6 341 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 CPA3P15088 417 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 PPP3CCP48454 512 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 DSG1Q02413 1049 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 KATNAL2Q8IYT4 538 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TUBGCP4Q9UGJ1 667 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 HMGCRP04035 888 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ECSITQ9BQ95 431 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 IL1RAPL1Q9NZN1 696 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ATRNO75882 1429 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 RENBPP51606 427 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 NEK2P51955 445 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 OVGP1Q12889 678 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 SDE2Q6IQ49 451 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 SCUBE1Q8IWY4 988 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 DDI1Q8WTU0 396 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 SEPT8Q92599 483 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 PTPN4P29074 926 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 NDST1P52848 882 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MTM1Q13496 603 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 LRRC36Q1X8D7 754 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MYO1HQ8N1T3 1032 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 PGM2Q96G03 612 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 ADGRE3Q9BY15 652 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 GBA2Q9HCG7 927 aaPredicted RBP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
PTCD1-201ENST00000292478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.18□□□□□ -0.3
PTCD1-201ENST00000292478 MYO1GB0I1T2 1018 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 FKBP6O75344 327 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ITGALP20701 1170 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 CCR1P32246 355 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 CDH17Q12864 832 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ADCK2Q7Z695 626 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 EMC1Q8N766 993 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 TUBGCP3Q96CW5 907 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 MICAL2O94851 1124 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms