RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TPCN2Q8NHX9 752 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TMEM143Q96AN5 459 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 OLFM1Q99784 485 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ACAD9Q9H845 621 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 STRCP1A6NGW2 1772 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 NCKAP1LP55160 1127 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 DCAF6Q58WW2 860 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 SNX30Q5VWJ9 437 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 SLC7A14Q8TBB6 771 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TMEM120AQ9BXJ8 343 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 HDHD2Q9H0R4 259 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 METTL5Q9NRN9 209 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 PIN4Q9Y237 131 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TNPO2O14787 897 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 PMPCBO75439 489 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF682O95780 498 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 NPEPPSP55786 919 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GALNTL6Q49A17 601 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ATP6AP1LQ52LC2 224 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TRIQKQ629K1 86 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DDX53Q86TM3 631 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 C10orf53Q8N6V4 93 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 FBXO36Q8NEA4 188 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ATG4AQ8WYN0 398 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 KLHL3Q9UH77 587 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ADAM30Q9UKF2 790 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TMA7Q9Y2S6 64 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 PDS5AQ29RF7 1337 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TBC1D12O60347 775 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GSTM1P09488 218 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 C1DQ13901 141 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TMEM132DQ14C87 1099 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ZC2HC1CQ53FD0 456 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 XKR3Q5GH77 459 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 C12orf60Q5U649 245 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CLVS1Q8IUQ0 354 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 WDR36Q8NI36 951 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 SPATA16Q9BXB7 569 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 NT5C1AQ9BXI3 368 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 C6orf62Q9GZU0 229 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 SERHL2Q9H4I8 314 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 SERHLQ9NQF3 203 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CYP39A1Q9NYL5 469 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CHKBQ9Y259 395 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 KLHL20Q9Y2M5 609 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CENPXA8MT69 81 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ETFBP38117 255 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GLRBP48167 497 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ST8SIA6P61647 398 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 NFIL3Q16649 462 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DGKKQ5KSL6 1271 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 WASHC2DQ5SRD0 308 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 RMND5BQ96G75 393 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 SRPK1Q96SB4 655 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 MUC3BQ9H195 1237 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CHST12Q9NRB3 414 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 PSTPIP1O43586 416 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 PLEKP08567 350 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 S100A1P23297 94 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GTF2H1P32780 548 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 AVPR1AP37288 418 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CNTN1Q12860 1018 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 HIST2H2ACQ16777 129 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TBCELQ5QJ74 424 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 HIST2H2AA3Q6FI13 130 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 NEK10Q6ZWH5 1172 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DEFB107AQ8IZN7 70 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DPP10Q8N608 796 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM45AQ8TCE6 357 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 AENQ8WTP8 325 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 SYN2Q92777 582 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 THAP2Q9H0W7 228 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 CATSPERBQ9H7T0 1116 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DNAAF2Q9NVR5 837 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 TRMT6Q9UJA5 497 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 GMEB1Q9Y692 573 aa11.07□□□□□ -0.64
PKNOX1-201ENST00000291547 NR5A2O00482 541 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 STX7O15400 261 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 FCGR1AP12314 374 aa11.06□□□□□ -0.64
PKNOX1-201ENST00000291547 KRT20P35900 424 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms