RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PIK3R2O00459 728 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 ZNF263O14978 683 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 CYP1A1P04798 512 aaPredicted RBP28.21■■■□□ 2.11
SSU72-201ENST00000291386 GDI1P31150 447 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 BSPRYQ5W0U4 402 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 BTBD8Q5XKL5 378 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 SCUBE3Q8IX30 993 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 SLC20A1Q8WUM9 679 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 BRD9Q9H8M2 597 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 ABCC13Q9NSE7 274 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 COL4A2P08572 1712 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 TECTAO75443 2155 aa28.2■■■□□ 2.11
SSU72-201ENST00000291386 PAPSS1O43252 624 aaPredicted RBP28.2■■■□□ 2.1
SSU72-201ENST00000291386 TBX18O95935 607 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 MTF1Q14872 753 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 TRIM72Q6ZMU5 477 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 BEND5Q7L4P6 421 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 CLEC4CQ8WTT0 213 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 ASIC4Q96FT7 647 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 FAM83CQ9BQN1 747 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 KLF16Q9BXK1 252 aaPredicted RBP28.2■■■□□ 2.1
SSU72-201ENST00000291386 NACA2Q9H009 215 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 MIS12Q9H081 205 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 OLA1Q9NTK5 396 aaKnown RBP28.2■■■□□ 2.1
SSU72-201ENST00000291386 DNMT3LQ9UJW3 386 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 CAPN11Q9UMQ6 739 aa28.2■■■□□ 2.1
SSU72-201ENST00000291386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.2■■■□□ 2.18e-7■□□□□ 9
SSU72-201ENST00000291386 NOMO3P69849 1222 aa28.19■■■□□ 2.1
SSU72-201ENST00000291386 ARID5AQ03989 594 aa28.19■■■□□ 2.1
SSU72-201ENST00000291386 PTPN20Q4JDL3 420 aa28.19■■■□□ 2.1
SSU72-201ENST00000291386 SFMBT2Q5VUG0 894 aa28.19■■■□□ 2.1
SSU72-201ENST00000291386 NUCKS1Q9H1E3 243 aaKnown RBP28.19■■■□□ 2.1
SSU72-201ENST00000291386 LTFP02788 710 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 PRKCIP41743 596 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 GABRB2P47870 512 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 C10orf120Q5SQS8 335 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 HFE2Q6ZVN8 426 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 IPO4Q8TEX9 1081 aaKnown RBP28.18■■■□□ 2.1
SSU72-201ENST00000291386 GOLGA1Q92805 767 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 ASNSD1Q9NWL6 643 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 SMPD4Q9NXE4 827 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 TJP2Q9UDY2 1190 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 NUDT5Q9UKK9 219 aa28.18■■■□□ 2.1
SSU72-201ENST00000291386 MLLT6P55198 1093 aaPredicted RBP28.17■■■□□ 2.1
SSU72-201ENST00000291386 ZBED6P86452 979 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 SPECC1LQ69YQ0 1117 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 CC2D1AQ6P1N0 951 aaPredicted RBP28.17■■■□□ 2.1
SSU72-201ENST00000291386 ZDHHC17Q8IUH5 632 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 VSTM4Q8IW00 320 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 ZNF397Q8NF99 534 aaPredicted RBP28.17■■■□□ 2.1
SSU72-201ENST00000291386 OSCP1Q8WVF1 389 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 SYN2Q92777 582 aaPredicted RBP28.17■■■□□ 2.1
SSU72-201ENST00000291386 AGPAT1Q99943 283 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 SYT11Q9BT88 431 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 TRIM62Q9BVG3 475 aa28.17■■■□□ 2.1
SSU72-201ENST00000291386 TICRRQ7Z2Z1 1910 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 E2F8A0AVK6 867 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 ERBB2P04626 1255 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 GYPCP04921 128 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 GLI1P08151 1106 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 UNGP13051 313 aaPredicted RBP28.16■■■□□ 2.1
SSU72-201ENST00000291386 PDGFRLQ15198 375 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 ASIC2Q16515 512 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 MSANTD2Q6P1R3 559 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 RSRC2Q7L4I2 434 aaKnown RBP28.16■■■□□ 2.1
SSU72-201ENST00000291386 ERICH1Q86X53 443 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 GKN1Q9NS71 199 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 CFAP97Q9P2B7 532 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 FBXL21Q9UKT6 434 aa28.16■■■□□ 2.1
SSU72-201ENST00000291386 AP5Z1O43299 807 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 FYNP06241 537 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 COG7P83436 770 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 GOLGA8FQ08AF8 430 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 GOLGA8DPQ0D2H9 430 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 TRIM14Q14142 442 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 SLC44A4Q53GD3 710 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 E4F1Q66K89 784 aaPredicted RBP28.15■■■□□ 2.1
SSU72-201ENST00000291386 MSANTD4Q8NCY6 345 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 RNF139Q8WU17 664 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 EDEM1Q92611 657 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 ZFYVE19Q96K21 471 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 PCDHB18PQ96TA0 734 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 STRIP2Q9ULQ0 834 aa28.15■■■□□ 2.1
SSU72-201ENST00000291386 LUC7L2Q9Y383 392 aaKnown RBP28.15■■■□□ 2.1
SSU72-201ENST00000291386 TMEM221A6NGB7 291 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 M0R296 226 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 MDM4O15151 490 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 GREM1O60565 184 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 GLULP15104 373 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 SCNN1AP37088 669 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 YWHAZP63104 245 aaKnown RBP28.14■■■□□ 2.1
SSU72-201ENST00000291386 PRKCQQ04759 706 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 EFEMP1Q12805 493 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 EFHC1Q5JVL4 640 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 NAA35Q5VZE5 725 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 OLFML1Q6UWY5 402 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 FAM183BPQ6ZVS7 135 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 HTR3DQ70Z44 454 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 BMP8AQ7Z5Y6 402 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 OLIG1Q8TAK6 271 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms