RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 USP18Q9UMW8 372 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 SLC22A2O15244 555 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 STX11O75558 287 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ITGALP20701 1170 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 SMIM11AP58511 58 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 POLR2LP62875 67 aaKnown RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 MRPS15P82914 257 aaKnown RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 PCSK1NQ9UHG2 260 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 OCM2P0CE71 109 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 OCMP0CE72 109 aaPredicted RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 MYO1HQ8N1T3 1032 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 TMEM117Q9H0C3 514 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ZNF229Q9UJW7 825 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 COL1A2P08123 1366 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ENO1P06733 434 aaKnown RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 UQCRBP14927 111 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ATXN3P54252 364 aaPredicted RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 NME3Q13232 169 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 SLC25A23Q9BV35 468 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ACOT9Q9Y305 439 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 SCTRP47872 440 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 FAM45BPQ6NSW5 357 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ABRAQ8N0Z2 381 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 FHOD1Q9Y613 1164 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 APOC4-APOC2K7ER74 178 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 APOC2P02655 101 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 MTMR2Q13614 643 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 TRIP10Q15642 601 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 CD274Q9NZQ7 290 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 NFASCO94856 1347 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 MED24O75448 989 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 HNRNPCP07910 306 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 16.1
SEC16A-202ENST00000290037 OOSP2Q86WS3 158 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SERPINB11Q96P15 392 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 CHP1Q99653 195 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 CASS4Q9NQ75 786 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DPP3Q9NY33 737 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 B2RBV5 119 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 PDE9AO76083 593 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 ALDH18A1P54886 795 aaKnown RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 RRP1BQ14684 758 aaKnown RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 GRM3Q14832 879 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DENND1BQ6P3S1 775 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 HELQQ8TDG4 1101 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 FANCEQ9HB96 536 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DERAQ9Y315 318 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 H3BNX3 289 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 CYP2D6P10635 497 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 OSTNP61366 133 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 TTC27Q6P3X3 843 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 MAGED2Q9UNF1 606 aaPredicted RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 AURKCQ9UQB9 309 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SH3BP1Q9Y3L3 701 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SQORQ9Y6N5 450 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 TRIM66O15016 1216 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 TGDSO95455 350 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 FAM98BQ52LJ0 330 aaKnown RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 METTL7BQ6UX53 244 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 PLEKHM3Q6ZWE6 761 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 ATL1Q8WXF7 558 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 WDR41Q9HAD4 459 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SLC40A1Q9NP59 571 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 LATS2Q9NRM7 1088 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 RNASEH1O60930 286 aaKnown RBP15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DDHD2O94830 711 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 BMT2Q1RMZ1 405 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SLC5A5Q92911 643 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 IRAK4Q9NWZ3 460 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DTNAQ9Y4J8 743 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 CABYRO75952 493 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 BNC1Q01954 994 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 DEPDC1Q5TB30 811 aa15.22■□□□□ 0.03
SEC16A-202ENST00000290037 C17orf102A2RUQ5 167 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 F5H5T6 163 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 RPS6KA3P51812 740 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 XRCC4Q13426 336 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 FRG1Q14331 258 aaKnown RBP15.21■□□□□ 0.03
SEC16A-202ENST00000290037 BHLHB9Q6PI77 547 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 CENPXA8MT69 81 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 RECQL5O94762 991 aaPredicted RBP15.21■□□□□ 0.03
SEC16A-202ENST00000290037 NUDT17P0C025 328 aa15.21■□□□□ 0.03
SEC16A-202ENST00000290037 PPIBP23284 216 aaKnown RBP15.21■□□□□ 0.03
SEC16A-202ENST00000290037 TBX2Q13207 712 aaPredicted RBP15.21■□□□□ 0.03
SEC16A-202ENST00000290037 AENQ8WTP8 325 aaKnown RBP15.21■□□□□ 0.03
SEC16A-202ENST00000290037 ADNPQ9H2P0 1102 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms