RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PSMD10O75832 226 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 PTK7Q13308 1070 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF384Q8TF68 577 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 NCLNQ969V3 563 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 UROC1Q96N76 676 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 MRPL1Q9BYD6 325 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 SLC28A3Q9HAS3 691 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ACADSBP45954 432 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 LHX1P48742 406 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 EVX2Q03828 476 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 FIGNQ5HY92 759 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 PLEKHA7Q6IQ23 1121 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 SLC30A5Q8TAD4 765 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 MED15Q96RN5 788 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF184Q99676 751 aaPredicted RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 AIPL1Q9NZN9 384 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 IPO11Q9UI26 975 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 AP4S1Q9Y587 144 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 MAFO75444 373 aaPredicted RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 MYL2P10916 166 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 PSMC3P17980 439 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 EPHB3P54753 998 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 OTUD4Q01804 1114 aaKnown RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 SPEF2Q9C093 1822 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 XYLBO75191 536 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 FKBP6O75344 327 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 ITGB3P05106 788 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 KLRC2P26717 231 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 HSPA13P48723 471 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TRMT5Q32P41 509 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PSRC1Q6PGN9 363 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 CCDC80Q76M96 950 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TTC30AQ86WT1 665 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SLC25A41Q8N5S1 370 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 FAM111AQ96PZ2 611 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 KCNMB3Q9NPA1 279 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 GDF3Q9NR23 364 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PCMTD2Q9NV79 361 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 STK39Q9UEW8 545 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 APPL1Q9UKG1 709 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 NUP98P52948 1817 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 C16orf96A6NNT2 1141 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 DGKIO75912 1065 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 CTNNB1P35222 781 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 ZNF200P98182 395 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 GIT2Q14161 759 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 GLRA4Q5JXX5 417 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 C16orf89Q6UX73 402 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SLC13A5Q86YT5 568 aaPredicted RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TMCO5AQ8N6Q1 288 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 GPR20Q99678 358 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SNX3O60493 162 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SERPINI2O75830 405 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 KRT16P08779 473 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TAC1P20366 129 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PTDSS1P48651 473 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 AMPD2Q01433 879 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TBL3Q12788 808 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 CHI3L2Q15782 390 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 OLFML1Q6UWY5 402 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PATL1Q86TB9 770 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 MRPS31Q92665 395 aaKnown RBP11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 UVRAGQ9P2Y5 699 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 F8W8V4 182 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SMPD1P17405 629 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 HEATR4Q86WZ0 1026 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 IP6K2Q9UHH9 426 aa11.76□□□□□ -0.53
NPC1L1-201ENST00000289547 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
NPC1L1-201ENST00000289547 F5H423 210 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms