RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SPTLC1O15269 473 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PEX1O43933 1283 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PSMG1O95456 288 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CD4P01730 458 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ICAM1P05362 532 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PPP4CP60510 307 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 CDK16Q00536 496 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 NEDD8Q15843 81 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ADCK2Q7Z695 626 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 C11orf96Q7Z7L8 435 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ZNF333Q96JL9 665 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 COPS7BQ9H9Q2 264 aaPredicted RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 LZTS3O60299 673 aaPredicted RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 ZMPSTE24O75844 475 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 MGAT1P26572 445 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 GRIP2Q9C0E4 1043 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 PCDH9Q9HC56 1237 aa15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 AGO4Q9HCK5 861 aaKnown RBP15.8■□□□□ 0.12
SHROOM4-201ENST00000289292 BAIAP3O94812 1187 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 ASMTLO95671 621 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 APOA4P06727 396 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 FBXW4P57775 412 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 KCNV1Q6PIU1 500 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 SLFN11Q7Z7L1 901 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 OR6Y1Q8NGX8 325 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 FRMD8P1Q9BZ68 369 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 CAB39Q9Y376 341 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 PRR23D1E9PI22 279 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 PRR23D2P0DMB1 279 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 FLT3P36888 993 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 PKNOX1P55347 436 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 TTC23LQ6PF05 361 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 KCTD14Q9BQ13 255 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 AFF2P51816 1311 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 A8MUI8 341 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 MAP3K7CLP57077 242 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 RUNX1T1Q06455 604 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 LINC00523Q86TU6 105 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 KAT5Q92993 513 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 FAM237BA0A1B0GVD1 139 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 ZNF197O14709 1029 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 TADA2AO75478 443 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 TRAF2Q12933 501 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 PDK2Q15119 407 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 MGAT5BQ3V5L5 792 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 LRRN4Q8WUT4 740 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 GPR63Q9BZJ6 419 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 TMA7Q9Y2S6 64 aaKnown RBP15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 MTFR1Q15390 333 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 MAPK11Q15759 364 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 ABRAQ8N0Z2 381 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 PPP2R3CQ969Q6 453 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 TRAPPC9Q96Q05 1148 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 WWOXQ9NZC7 414 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 LRCH1Q9Y2L9 728 aa15.79■□□□□ 0.12
SHROOM4-201ENST00000289292 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 C1orf232A0A0U1RR37 186 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 GH1P01241 217 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 MARCKSL1P49006 195 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 ADARP55265 1226 aaKnown RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 RAD51Q06609 339 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 KBTBD12Q3ZCT8 623 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 NPNTQ6UXI9 565 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 TSHZ1Q6ZSZ6 1077 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 PTAR1Q7Z6K3 402 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 RIOX1Q9H6W3 641 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 MEGF6O75095 1541 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 NRF1Q16656 503 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 SLC35C1Q96A29 364 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 LRRC40Q9H9A6 602 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 TCF7L2Q9NQB0 619 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 PRMT7Q9NVM4 692 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 PROCP04070 461 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 NNMTP40261 264 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 ABCG1P45844 678 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 TMC5Q6UXY8 1006 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 KYQ8NBH2 561 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 FRMD8Q9BZ67 464 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 DCXO43602 365 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 DRD4P21917 467 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 MMRN1Q13201 1228 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 OTUD3Q5T2D3 398 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 CLVS1Q8IUQ0 354 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 FAM151AQ8WW52 585 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 RNF225M0QZC1 329 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 TNIP2Q8NFZ5 429 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 RBBP8Q99708 897 aa15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 TRIM45Q9H8W5 580 aaPredicted RBP15.78■□□□□ 0.12
SHROOM4-201ENST00000289292 OGTO15294 1046 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 ZNF682O95780 498 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 STAG3L1P0CL83 205 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 CXCL8P10145 99 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 VDRP11473 427 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 GSSP48637 474 aa15.77■□□□□ 0.12
SHROOM4-201ENST00000289292 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms