RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 M0QZQ0 153 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 ENDOD1O94919 500 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 NUDT17P0C025 328 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 MYZAPP0CAP1 466 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 RARGP13631 454 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 FPGSQ05932 587 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 C16orf59Q7L2K0 433 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 OTOP2Q7RTS6 562 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 UHMK1Q8TAS1 419 aaKnown RBP21.88■■□□□ 1.09
YBX3-202ENST00000279550 SUSD3Q96L08 255 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 CENPHQ9H3R5 247 aa21.88■■□□□ 1.09
YBX3-202ENST00000279550 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.88■■□□□ 1.09
YBX3-202ENST00000279550 DNAJC17Q9NVM6 304 aaKnown RBP21.88■■□□□ 1.09
YBX3-202ENST00000279550 PRG3Q9Y2Y8 225 aaPredicted RBP21.88■■□□□ 1.09
YBX3-202ENST00000279550 TIMM13Q9Y5L4 95 aaPredicted RBP21.88■■□□□ 1.09
YBX3-202ENST00000279550 NRP1O14786 923 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 PRPSAP2O60256 369 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 PECAM1P16284 738 aaPredicted RBP21.87■■□□□ 1.09
YBX3-202ENST00000279550 SDC4P31431 198 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 LHX1P48742 406 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 LMNB2Q03252 620 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 SLC29A2Q14542 456 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 SLMAPQ14BN4 828 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 MDH1BQ5I0G3 518 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 SLC26A9Q7LBE3 791 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 ZDHHC17Q8IUH5 632 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 CCDC89Q8N998 374 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 HTATIP2Q9BUP3 242 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 CALN1Q9BXU9 219 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 CRTAC1Q9NQ79 661 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 CYLDQ9NQC7 956 aa21.87■■□□□ 1.09
YBX3-202ENST00000279550 FNDC1Q4ZHG4 1894 aaPredicted RBP21.87■■□□□ 1.09
YBX3-202ENST00000279550 HMGB1P1B2RPK0 211 aaPredicted RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 XPO1O14980 1071 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 RIPK2O43353 540 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 BEST1O76090 585 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 CYP11A1P05108 521 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 ITGAVP06756 1048 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 CDH6P55285 790 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 SNX16P57768 344 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 DPYSL3Q14195 570 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 CA9Q16790 459 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 P3H1Q32P28 736 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 KRT71Q3SY84 523 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 ZC3H12AQ5D1E8 599 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 DENND2CQ68D51 928 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 SCYL2Q6P3W7 929 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 PIGZQ86VD9 579 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 NDRG1Q92597 394 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 TMEM121Q9BTD3 319 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 C11orf84Q9BUA3 381 aaPredicted RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 DDX23Q9BUQ8 820 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 DUSP16Q9BY84 665 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 DNAI2Q9GZS0 605 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 ADAM7Q9H2U9 754 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 DDX43Q9NXZ2 648 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 DSEQ9UL01 958 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 GOLGA6L10A6NI86 522 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 ALDH2P05091 517 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 HDAC4P56524 1084 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 CAV1Q03135 178 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 HIBCHQ6NVY1 386 aaPredicted RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 TMCO2Q7Z6W1 182 aaPredicted RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 SPATA18Q8TC71 538 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 HSFY1Q96LI6 401 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 TMEM175Q9BSA9 504 aa21.86■■□□□ 1.09
YBX3-202ENST00000279550 CDC42EP4Q9H3Q1 356 aaKnown RBP21.86■■□□□ 1.09
YBX3-202ENST00000279550 ARHGEF37A1IGU5 675 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 SCNN1AP37088 669 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 PTPN9P43378 593 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 ACADSBP45954 432 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 SLC11A1P49279 550 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 RABGGTBP53611 331 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 ATXN1P54253 815 aaKnown RBP21.85■■□□□ 1.09
YBX3-202ENST00000279550 EIF3BP55884 814 aaKnown RBP21.85■■□□□ 1.09
YBX3-202ENST00000279550 SKOR1P84550 965 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 PLCB3Q01970 1234 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 IFFO1Q0D2I5 559 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 AGBL2Q5U5Z8 902 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 NPNTQ6UXI9 565 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 ZNF689Q96CS4 500 aaPredicted RBP21.85■■□□□ 1.09
YBX3-202ENST00000279550 SNRNP25Q9BV90 132 aaKnown RBP21.85■■□□□ 1.09
YBX3-202ENST00000279550 ADAM28Q9UKQ2 775 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 COL4A6Q14031 1691 aa21.85■■□□□ 1.09
YBX3-202ENST00000279550 DNALI1O14645 258 aaPredicted RBP21.84■■□□□ 1.09
YBX3-202ENST00000279550 TRAPPC3O43617 180 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 TADA2AO75478 443 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 FGBP02675 491 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 GALTP07902 379 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 SYN1P17600 705 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 ATP1A2P50993 1020 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 ADCY1Q08828 1119 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 FAM117BQ6P1L5 589 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 KDM7AQ6ZMT4 941 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 METTL23Q86XA0 190 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 TEKT4Q8WW24 435 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 SYT15Q9BQS2 421 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 MED10Q9BTT4 135 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 RC3H2Q9HBD1 1191 aaKnown RBP21.84■■□□□ 1.09
YBX3-202ENST00000279550 PCDH18Q9HCL0 1135 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms