RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SNRNP25Q9BV90 132 aaKnown RBP15.17■□□□□ 0.02
TRIM23-202ENST00000274327 RAB17Q9H0T7 212 aa15.17■□□□□ 0.02
TRIM23-202ENST00000274327 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.17■□□□□ 0.02
TRIM23-202ENST00000274327 ECHS1P30084 290 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 MAGEA11P43364 429 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 KCNJ1P48048 391 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 ATXN1P54253 815 aaKnown RBP15.16■□□□□ 0.02
TRIM23-202ENST00000274327 WDR5P61964 334 aaKnown RBP15.16■□□□□ 0.02
TRIM23-202ENST00000274327 CUL1Q13616 776 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 PDK2Q15119 407 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 SCYL2Q6P3W7 929 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 DRICH1Q6PGQ1 229 aaPredicted RBP15.16■□□□□ 0.02
TRIM23-202ENST00000274327 BBS12Q6ZW61 710 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 TAS1R1Q7RTX1 841 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 CCDC105Q8IYK2 499 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 ERP44Q9BS26 406 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
TRIM23-202ENST00000274327 FUT8Q9BYC5 575 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 RASAL2Q9UJF2 1139 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 STAP1Q9ULZ2 295 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 UTP11Q9Y3A2 253 aaKnown RBP15.16■□□□□ 0.02
TRIM23-202ENST00000274327 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
TRIM23-202ENST00000274327 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 H7C4K7 107 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 BAIAP3O94812 1187 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 LTFP02788 710 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 EPHB4P54760 987 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 DRG2P55039 364 aaKnown RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 CDH6P55285 790 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 PITX1P78337 314 aaPredicted RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 SNX1Q13596 522 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 DPYSL3Q14195 570 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 SYPL2Q5VXT5 272 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 BEND5Q7L4P6 421 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 C8orf48Q96LL4 319 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 TTPALQ9BTX7 342 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ZNF487B1APH4 448 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 MAP2K7O14733 419 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 LIASO43766 372 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ACRP10323 421 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 GRIK1P39086 918 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ALDH7A1P49419 539 aaKnown RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 SLC5A3P53794 718 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 GPR17Q13304 367 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 CA9Q16790 459 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ZC3H12AQ5D1E8 599 aaKnown RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ERMARDQ5T6L9 678 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 EMBQ6PCB8 327 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 RSPO2Q6UXX9 243 aaPredicted RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ANKS3Q6ZW76 656 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 DDX42Q86XP3 938 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 ATL2Q8NHH9 583 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 IFT81Q8WYA0 676 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 CAVIN3Q969G5 261 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 EXOC4Q96A65 974 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 FAF2Q96CS3 445 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 PGAP3Q96FM1 320 aaPredicted RBP15.15■□□□□ 0.02
TRIM23-202ENST00000274327 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 VN1R3Q9BXE9 311 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 PCDH18Q9HCL0 1135 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 GPATCH2LQ9NWQ4 482 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 RRN3Q9NYV6 651 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 NFU1Q9UMS0 254 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 KIAA1671Q9BY89 1806 aa15.15■□□□□ 0.02
TRIM23-202ENST00000274327 TRIM66O15016 1216 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 DAPK3O43293 454 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 CST8O60676 142 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 SASH3O75995 380 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 ECEL1O95672 775 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 IL4RP24394 825 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
TRIM23-202ENST00000274327 SMARCB1Q12824 385 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 NNTQ13423 1086 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 DPYSL2Q16555 572 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 SYDE1Q6ZW31 735 aaPredicted RBP15.14■□□□□ 0.01
TRIM23-202ENST00000274327 MAP7D3Q8IWC1 876 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 SCAMP5Q8TAC9 235 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 GRK7Q8WTQ7 553 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 FRMD8P1Q9BZ68 369 aaPredicted RBP15.14■□□□□ 0.01
TRIM23-202ENST00000274327 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 FZD10Q9ULW2 581 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 NEU2Q9Y3R4 380 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 GREB1Q4ZG55 1949 aa15.14■□□□□ 0.01
TRIM23-202ENST00000274327 MTMR11A4FU01 709 aa15.13■□□□□ 0.01
TRIM23-202ENST00000274327 M0QYT0 321 aa15.13■□□□□ 0.01
TRIM23-202ENST00000274327 CAPN9O14815 690 aa15.13■□□□□ 0.01
TRIM23-202ENST00000274327 VNN2O95498 520 aa15.13■□□□□ 0.01
TRIM23-202ENST00000274327 MMRN1Q13201 1228 aa15.13■□□□□ 0.01
TRIM23-202ENST00000274327 PTK6Q13882 451 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms