RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SCYL2Q6P3W7 929 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 BEND5Q7L4P6 421 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 HSPH1Q92598 858 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 RUBCNQ92622 972 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 CRISPLD1Q9H336 500 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 EFR3BQ9Y2G0 817 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 WDR27A2RRH5 827 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 MDM4O15151 490 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 KRT10P13645 584 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 CHRNA3P32297 505 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 PPM1AP35813 382 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 GLUD2P49448 558 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 ATXN1P54253 815 aaKnown RBP23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 ROR1Q01973 937 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 FBXO38Q6PIJ6 1188 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 NUP93Q8N1F7 819 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 HTATIP2Q9BUP3 242 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 AAASQ9NRG9 546 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 RRN3Q9NYV6 651 aa23.89■■□□□ 1.41
SMARCB1-201ENST00000263121 PLXNA3P51805 1871 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 CAPN9O14815 690 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 HAPLN1P10915 354 aaPredicted RBP23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 VSNL1P62760 191 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 SLC7A5Q01650 507 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 ADCY2Q08462 1091 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 BSPRYQ5W0U4 402 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 FIBCD1Q8N539 461 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 KCTD6Q8NC69 237 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 MAGOHBQ96A72 148 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 SLC9A7Q96T83 725 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 CLSTN3Q9BQT9 956 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 SNRNP25Q9BV90 132 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 TRIM62Q9BVG3 475 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 LRRC19Q9H756 370 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 IL37Q9NZH6 218 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 STIM2Q9P246 746 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 AMACRQ9UHK6 382 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 INSL6Q9Y581 213 aa23.88■■□□□ 1.41
SMARCB1-201ENST00000263121 CD48P09326 243 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 NCAM1P13591 858 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 RPL17P18621 184 aaKnown RBP23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 OR1D2P34982 312 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 SDHAF4Q5VUM1 108 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 HERC6Q8IVU3 1022 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 CCDC26Q8TAB7 109 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 CLP1Q92989 425 aaKnown RBP23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 PGAP3Q96FM1 320 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 SLC27A5Q9Y2P5 690 aa23.87■■□□□ 1.41
SMARCB1-201ENST00000263121 M0QYT0 321 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 C2CD2LO14523 706 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 TJP3O95049 919 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 RDXP35241 583 aaKnown RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 ERMARDQ5T6L9 678 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 TTC27Q6P3X3 843 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 FAM71BQ8TC56 605 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 PHOSPHO2Q8TCD6 241 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 SP7Q8TDD2 431 aaPredicted RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 SPATA17Q96L03 361 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 ZBED2Q9BTP6 218 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 PCYOX1Q9UHG3 505 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 ZMYND8Q9ULU4 1186 aaPredicted RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 SCML2Q9UQR0 700 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 PCDHB12Q9Y5F1 795 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 SLC4A7Q9Y6M7 1214 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 MYO16Q9Y6X6 1858 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 HEXIM1O94992 359 aaKnown RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 MCM3P25205 808 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 FNTAP49354 379 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 CDH6P55285 790 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 YWHAGP61981 247 aaKnown RBP eCLIP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 IFRD2Q12894 506 aaPredicted RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 DUSP4Q13115 394 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 PDK2Q15119 407 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 MGAT5BQ3V5L5 792 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 KAZNQ674X7 775 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 MAATS1Q7Z4T9 603 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 EDEM1Q92611 657 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 DCLK3Q9C098 648 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 FBXO44Q9H4M3 255 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 GPATCH2LQ9NWQ4 482 aa23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 R3HDM2Q9Y2K5 976 aaKnown RBP23.86■■□□□ 1.41
SMARCB1-201ENST00000263121 FAM92AA1XBS5 289 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 BHMG1C9JSJ3 638 aaPredicted RBP23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 SOAT2O75908 522 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 URODP06132 367 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 COILP38432 576 aaPredicted RBP23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 DEUP1Q05D60 604 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 DHX34Q14147 1143 aaKnown RBP23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 DPYSL3Q14195 570 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 BRD3Q15059 726 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 CA9Q16790 459 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 ZC3H12AQ5D1E8 599 aaKnown RBP23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 CCDC137Q6PK04 289 aaKnown RBP23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 SCD5Q86SK9 330 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 FAM131BQ86XD5 332 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 VSIG1Q86XK7 387 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 GPR65Q8IYL9 337 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 VPS52Q8N1B4 723 aa23.85■■□□□ 1.41
SMARCB1-201ENST00000263121 CCDC185Q8N715 623 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms