RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PRDM16Q9HAZ2 1276 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 NT5MQ9NPB1 228 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 CAPN7Q9Y6W3 813 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 AKAP12Q02952 1782 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 IGKV6D-41A0A0C4DH26 115 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 FGF19O95750 216 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 TGM2P21980 687 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 GLUD2P49448 558 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 NCKAP1LP55160 1127 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 PPP2R2AP63151 447 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 NFIL3Q16649 462 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 COBLL1Q53SF7 1204 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 SPOCD1Q6ZMY3 1216 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 C7orf61Q8IZ16 206 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 COG1Q8WTW3 980 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.11
CDH1-201ENST00000261769 YIPF2Q9BWQ6 316 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 C1QTNF7Q9BXJ2 289 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 TLE6Q9H808 572 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.11
CDH1-201ENST00000261769 DNMT3LQ9UJW3 386 aa14.4□□□□□ -0.11
CDH1-201ENST00000261769 TBC1D3BA6NDS4 549 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 POLR2EP19388 210 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 NOS2P35228 1153 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 OTUD4Q01804 1114 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 FUT2Q10981 343 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SLC26A7Q8TE54 656 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 LZICQ8WZA0 190 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 DUSP9Q99956 384 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 OXCT2Q9BYC2 517 aaPredicted RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 NIFKQ9BYG3 293 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 SPECC1L-ADORA2AF8WAN1 911 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 TSPAN3O60637 253 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 VPS26AO75436 327 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SPATA31C1P0DKV0 1188 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SMPD1P17405 629 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 PMS1P54277 932 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 SPPL2BQ8TCT7 592 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 C2orf49Q9BVC5 232 aaPredicted RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 RPS6KL1Q9Y6S9 549 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 CCDC130P13994 396 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 CYP2F1P24903 491 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 EEF1DP3Q658K8 133 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 EFL1Q7Z2Z2 1120 aaKnown RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 TOP6BLQ8N6T0 577 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 CLPBQ9H078 707 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 LRRC40Q9H9A6 602 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
CDH1-201ENST00000261769 AHDC1Q5TGY3 1603 aaPredicted RBP14.39□□□□□ -0.11
CDH1-201ENST00000261769 SDR42E2A6NKP2 422 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 TREHO43280 583 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ITGA8P53708 1063 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 KCNA1Q09470 495 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 PTK7Q13308 1070 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 UGCGQ16739 394 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 CTU1Q7Z7A3 348 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 DNAJC19Q96DA6 116 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 FAM208AQ9UK61 1670 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 NRXN3Q9Y4C0 1643 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 CCNE2O96020 404 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 LIG3P49916 1009 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ZCCHC2Q9C0B9 1178 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 A0A087X0B3 334 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 SOAT2O75908 522 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 CDC25CP30307 473 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 EFTUD2Q15029 972 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDH1-201ENST00000261769 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 SNX31Q8N9S9 440 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ELAC2Q9BQ52 826 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 SMYD3Q9H7B4 428 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 MRGBPQ9NV56 204 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ZW10O43264 779 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 H2AFYO75367 372 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 AGTP01019 485 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ARHGDIAP52565 204 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ABCE1P61221 599 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 ILF2Q12905 390 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 HYIQ5T013 277 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 C3orf20Q8ND61 904 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 WNT8BQ93098 351 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 ASPSCR1Q9BZE9 553 aa14.38□□□□□ -0.11
CDH1-201ENST00000261769 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
CDH1-201ENST00000261769 SUPT3HB4E1H0 165 aa14.37□□□□□ -0.11
CDH1-201ENST00000261769 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms