RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GARTP22102 1010 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 MRPS15P82914 257 aaKnown RBP19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 EML3Q32P44 896 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 TTLL9Q3SXZ7 439 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 ALFQ53S48 1182 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF333Q96JL9 665 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 SLC40A1Q9NP59 571 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 GTF2A1LQ9UNN4 478 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 PTPRUQ92729 1446 aa19.27■□□□□ 0.67
SMARCC1-201ENST00000254480 LINC00854A0A1B0GVQ3 168 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 ARHGEF9O43307 516 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 APOA1P02647 267 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CYP51A1Q16850 503 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 WDR49Q8IV35 697 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 SLC5A5Q92911 643 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 DAB1O75553 588 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PCDH8O95206 1070 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 UGT3A1Q6NUS8 523 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 NYAP1Q6ZVC0 841 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PPP1R2P1Q96PQ5 205 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CLPBQ9H078 707 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 SYTL2Q9HCH5 934 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 FAM107AO95990 144 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 POU1F1P28069 291 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 POTEAQ6S8J7 498 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 METTL7BQ6UX53 244 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PURBQ96QR8 312 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CCDC130P13994 396 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 AQP5P55064 265 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CAMK2GQ13555 558 aaPredicted RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PLCL1Q15111 1095 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PRPF18Q99633 342 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 PDGFDQ9GZP0 370 aaPredicted RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CCDC134Q9H6E4 229 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 GPAMQ9HCL2 828 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 EIF3LQ9Y262 564 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 MEGF6O75095 1541 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 H2AFYO75367 372 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 SLURP2P0DP57 97 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 CLK1P49759 484 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 NLRP9Q7RTR0 991 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 P2RX7Q99572 595 aaKnown RBP19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 FOXP3Q9BZS1 431 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 RBM22Q9NW64 420 aaKnown RBP eCLIP19.26■□□□□ 0.676e-9■■■■■ 32.5
SMARCC1-201ENST00000254480 GPRC5DQ9NZD1 345 aa19.26■□□□□ 0.67
SMARCC1-201ENST00000254480 TRPC5OSA6NMA1 111 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 GLRA3O75311 464 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ALDH2P05091 517 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 SERPINB8P50452 374 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ANGPT1Q15389 498 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 KIAA2013Q8IYS2 634 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 MED8Q96G25 268 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 GNG14A0A1W2PPG7 69 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 CCDC159P0C7I6 412 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 RCN1Q15293 331 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 C16orf59Q7L2K0 433 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 RIBC1Q8N443 379 aaPredicted RBP19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ACOX2Q99424 681 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 CD248Q9HCU0 757 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 HALP42357 657 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 KLC1Q07866 573 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 FAM171A1Q5VUB5 890 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ILDR2Q71H61 639 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 VN1R5Q7Z5H4 357 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF786Q8N393 782 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 SMIM22K7EJ46 135 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 CKBP12277 381 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 MLH1P40692 756 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 PDK2Q15119 407 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 RINLQ6ZS11 566 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 MYO1HQ8N1T3 1032 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ACTL9Q8TC94 416 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ZC4H2Q9NQZ6 224 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 HPSEQ9Y251 543 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 RASSF9O75901 435 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 DARSP14868 501 aaKnown RBP19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ZNF23P17027 643 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 ADORA2AP29274 412 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 TP53BP2Q13625 1128 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 CACHD1Q5VU97 1274 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 SYT15Q9BQS2 421 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 CNPY3Q9BT09 278 aa19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 DMGDHQ9UI17 866 aaKnown RBP19.25■□□□□ 0.67
SMARCC1-201ENST00000254480 STAU1O95793 577 aaKnown RBP19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ABCB1P08183 1280 aaPredicted RBP19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 AMPD1P23109 780 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 NTRK3Q16288 839 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 OVOS1Q6IE37 1185 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 FAM180AQ6UWF9 173 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 LRRC40Q9H9A6 602 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 AP5Z1O43299 807 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 MICAL2O94851 1124 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 TMC2Q8TDI7 906 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 ANKRD7Q92527 254 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 C16orf96A6NNT2 1141 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 WNT10BO00744 389 aa19.24■□□□□ 0.67
SMARCC1-201ENST00000254480 PROSCO94903 275 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms