RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CARD9Q9H257 536 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 LRRC4Q9HBW1 653 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ABCB6Q9NP58 842 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 SMARCAL1Q9NZC9 954 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 EHD2Q9NZN4 543 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PRKAG2Q9UGJ0 569 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 MYH10P35580 1976 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PDCD11Q14690 1871 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 SIGLEC16A6NMB1 481 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 KRIT1O00522 736 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 INPPL1O15357 1258 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 SIN3BO75182 1162 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ATP2C2O75185 946 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 DDHD2O94830 711 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 FGGP02679 453 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ALDH2P05091 517 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 LCP1P13796 627 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CTNNA2P26232 953 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 MAN1A1P33908 653 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CTNNA1P35221 906 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 RPL7AP62424 266 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 YWHAHQ04917 246 aaPredicted RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 ZNF211Q13398 564 aaPredicted RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 MAPRE1Q15691 268 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 HADHQ16836 314 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CEP57Q86XR8 500 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 XYLT1Q86Y38 959 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ZNF280BQ86YH2 543 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RHOT1Q8IXI2 618 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 SPATA4Q8NEY3 305 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 IFT43Q96FT9 208 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RNPC3Q96LT9 517 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
TTC1-201ENST00000231238 KRT82Q9NSB4 513 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CYTH4Q9UIA0 394 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 MTUS1Q9ULD2 1270 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 FAN1Q9Y2M0 1017 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PCDHA3Q9Y5H8 950 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CARNS1A5YM72 827 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 TMEM191CA6NGB0 347 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 PDE2AO00408 941 aaPredicted RBP10.22□□□□□ -0.77
TTC1-201ENST00000231238 CLDN5O00501 218 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 GABRDO14764 452 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
TTC1-201ENST00000231238 PSTPIP1O43586 416 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 CXCL10P02778 98 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 AMHP03971 560 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 NPR3P17342 541 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 TYMPP19971 482 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 MCM3P25205 808 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 CDR1P51861 262 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 BCAR1P56945 870 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 LRRC26Q2I0M4 334 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 C8orf74Q6P047 294 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 PMF1Q6P1K2 205 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
TTC1-201ENST00000231238 FAM183BPQ6ZVS7 135 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 LIMS2Q7Z4I7 341 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 ZDHHC17Q8IUH5 632 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 COLGALT2Q8IYK4 626 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 LRRC43Q8N309 656 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 TMEM199Q8N511 208 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
TTC1-201ENST00000231238 ACTRT1Q8TDG2 376 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 KRT35Q92764 455 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
TTC1-201ENST00000231238 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 GSX2Q9BZM3 304 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 TJP2Q9UDY2 1190 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 TBX21Q9UL17 535 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 NME7Q9Y5B8 376 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 PCNTO95613 3336 aa10.22□□□□□ -0.77
TTC1-201ENST00000231238 M0QZQ0 153 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 XPO1O14980 1071 aaKnown RBP10.21□□□□□ -0.78
TTC1-201ENST00000231238 GRAP2O75791 330 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 KRT1P04264 644 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 CYP11A1P05108 521 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 TUBBP07437 444 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 PDGFRAP16234 1089 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 GPD1P21695 349 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 SDC4P31431 198 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 RFC1P35251 1148 aaPredicted RBP10.21□□□□□ -0.78
TTC1-201ENST00000231238 GABRB2P47870 512 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 AARSP49588 968 aaKnown RBP eCLIP10.21□□□□□ -0.78
TTC1-201ENST00000231238 GATMP50440 423 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 MAP3K7CLP57077 242 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 SLC6A3Q01959 620 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 DSC1Q08554 894 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 ELAVL2Q12926 359 aaKnown RBP10.21□□□□□ -0.78
TTC1-201ENST00000231238 LINC00114Q6XXX2 140 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 C4orf50Q6ZRC1 276 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 CHSY3Q70JA7 882 aa10.21□□□□□ -0.78
TTC1-201ENST00000231238 RSRC2Q7L4I2 434 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms