RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 UHRF1Q96T88 793 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 TRIM7Q9C029 511 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 PPCSQ9HAB8 311 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 TMBIM4Q9HC24 238 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 MIOSQ9NXC5 875 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 GOLGA6AQ9NYA3 693 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 RRN3Q9NYV6 651 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 GRHL1Q9NZI5 618 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 VPS18Q9P253 973 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CYTH4Q9UIA0 394 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 DSEQ9UL01 958 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 ESYT3A0FGR9 886 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 ZSCAN5CA6NGD5 496 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 HIDE1A8MVS5 230 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 XPO1O14980 1071 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 MDM4O15151 490 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 POLR3GO15318 223 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 LIASO43766 372 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 TCEA3O75764 348 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 FBXO21O94952 628 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 CALCAP01258 141 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 PDGFRAP16234 1089 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 AKAP5P24588 427 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 SLC25A11Q02978 314 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 PTPROQ16827 1216 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 OR6B2Q6IFH4 312 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 AADACL2Q6P093 401 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 RHBDF2Q6PJF5 856 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 AGMOQ6ZNB7 445 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 BZW1Q7L1Q6 419 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 STRADAQ7RTN6 431 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 COLGALT1Q8NBJ5 622 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 KCTD6Q8NC69 237 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 POF1BQ8WVV4 589 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 AUTS2Q8WXX7 1259 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 HLA-CQ95604 372 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 PGM2Q96G03 612 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 ATP6V1G3Q96LB4 118 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-201ENST00000229265 KANSL3Q9P2N6 904 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 USP18Q9UMW8 372 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 FAN1Q9Y2M0 1017 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 SNX24Q9Y343 169 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 PLXNA3P51805 1871 aa11.14□□□□□ -0.63
CDCA3-201ENST00000229265 CFAP69A5D8W1 941 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 APOC4-APOC2K7ER74 178 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 CYB561D2O14569 222 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 EIF3HO15372 352 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 APOC2P02655 101 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 CYP11A1P05108 521 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 SDC4P31431 198 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ADCY8P40145 1251 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 RPL21P46778 160 aaKnown RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 NR2C2P49116 596 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 OGDHQ02218 1023 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 KRT17Q04695 432 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ADCY2Q08462 1091 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 DMTNQ08495 405 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 MAPRE1Q15691 268 aaKnown RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ZDHHC24Q6UX98 284 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 MFSD7Q6UXD7 560 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 SLC24A5Q71RS6 500 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 BEND5Q7L4P6 421 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ANKS1BQ7Z6G8 1248 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 RBM23Q86U06 439 aaKnown RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 ZNF280BQ86YH2 543 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 SLC35B2Q8TB61 432 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 UBA3Q8TBC4 463 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 FBXO25Q8TCJ0 367 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 RXFP2Q8WXD0 754 aa11.13□□□□□ -0.63
CDCA3-201ENST00000229265 RNF25Q96BH1 459 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-201ENST00000229265 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms