RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 TLR9Q9NR96 1032 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 DDX56Q9NY93 547 aaKnown RBP16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 PCSK1NQ9UHG2 260 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 MTUS1Q9ULD2 1270 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 GREB1Q4ZG55 1949 aa16.66■□□□□ 0.26
SNRPD3-201ENST00000215829 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 SLC38A8A6NNN8 435 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 H0YGN5 161 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ENDOD1O94919 500 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ZRANB2O95218 330 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 GJC1P36383 396 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 SULT1E1P49888 294 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ERVK-21P61565 698 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 SMC1AQ14683 1233 aaKnown RBP16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ZNF572Q7Z3I7 529 aaPredicted RBP16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 EXD1Q8NHP7 514 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 GIPC2Q8TF65 315 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 EDEM1Q92611 657 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 KLHL5Q96PQ7 755 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ZWILCHQ9H900 591 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 ABCC13Q9NSE7 274 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
SNRPD3-201ENST00000215829 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 C2orf71A6NGG8 1288 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PGRMC1O00264 195 aaKnown RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PRPSAP2O60256 369 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 ADH1AP07327 375 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 ALDH1A3P47895 512 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PGFP49763 221 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 MTMR3Q13615 1198 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CLUL1Q15846 466 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 OTUD1Q5VV17 481 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 BTBD8Q5XKL5 378 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 AADACL2Q6P093 401 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 RCOR2Q8IZ40 523 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 ARHGAP18Q8N392 663 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PEBP4Q96S96 227 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CEP290O15078 2479 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 ZNF638Q14966 1978 aaKnown RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 A0A1W2PQH9 124 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 M0QYT0 321 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PRRG1O14668 218 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 FSCN2O14926 492 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 GRM6O15303 877 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 TGM5O43548 720 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 FGGP02679 453 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PBX2P40425 430 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PITX1P78337 314 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 TAF10Q12962 218 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CAMK1Q14012 370 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 BOLA3Q53S33 107 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PLPP4Q5VZY2 271 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 SCYL2Q6P3W7 929 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 LILRA6Q6PI73 481 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CYP4V2Q6ZWL3 525 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 LRRN4CLQ8ND94 238 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 CMASQ8NFW8 434 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 FBXO32Q969P5 355 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 RPGRIP1Q96KN7 1286 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 NAP1L3Q99457 506 aaPredicted RBP16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 TTLL2Q9BWV7 592 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 PBX4Q9BYU1 374 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 NMUR1Q9HB89 426 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 GMIPQ9P107 970 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 YIPF1Q9Y548 306 aa16.64■□□□□ 0.25
SNRPD3-201ENST00000215829 MYO16Q9Y6X6 1858 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 HIDE1A8MVS5 230 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 RARAP10276 462 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 KLRC2P26717 231 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 ATXN1P54253 815 aaKnown RBP16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 ITIH3Q06033 890 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 SMTNL2Q2TAL5 461 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 KCNT1Q5JUK3 1230 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 SPATA4Q8NEY3 305 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 MICAL1Q8TDZ2 1067 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 RAPGEF5Q92565 580 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 RBM41Q96IZ5 413 aaKnown RBP16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 KLHL11Q9NVR0 708 aa16.63■□□□□ 0.25
SNRPD3-201ENST00000215829 H3BNC9 293 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 F9P00740 461 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 KRT1P04264 644 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 CSH1P0DML2 217 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 CSH2P0DML3 217 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms