RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Mmp10O55123 476 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 4930430A15RikQ05AC5 485 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Gpd1lQ3ULJ0 351 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Zfp957Q3UT76 567 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 MydgfQ9CPT4 166 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Itgb1bp2Q9R000 350 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Rbck1Q9WUB0 508 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Grk1Q9WVL4 564 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Ms4a14A0A087WSD2 1232 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Ssxb9A2BI93 185 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Gm1141B9EJU1 475 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Hspa9P38647 679 aaKnown RBP17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 GckP52792 465 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Cdh8P97291 799 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Slc24a2Q14BI1 711 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Serbp1Q9CY58 407 aaKnown RBP17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Terb2Q9D494 218 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Mgea5Q9EQQ9 916 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Ttll9A2APC3 461 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Prrg1A2BFE8 218 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Mbl1P39039 239 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 AurkaP97477 395 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Exoc3l4Q6DIA2 721 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Strip2Q8C9H6 844 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 CopaQ8CIE6 1224 aaKnown RBP17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Znf426Q8R1D1 550 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Olfr532Q8VGT4 309 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Dnajc19Q9CQV7 116 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 C1qtnf1Q9QXP7 281 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Zmynd8A2A484 1235 aaKnown RBP17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Klc1O88447 541 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 NrlP54846 237 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Xlr3cQ61806 226 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Rbm12b1Q80YR9 836 aaKnown RBP17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Osbpl6Q8BXR9 959 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Olfr615Q8VGY4 313 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Rfc5Q9D0F6 339 aa17.28■□□□□ 0.36
Usp47-201ENSMUST00000106653 Siah1aP61092 282 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Fam91a1Q3UVG3 837 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Tpp2Q64514 1262 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Txndc8Q69AB2 127 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Pgrmc2Q80UU9 217 aaKnown RBP17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Olfr30Q8VGD8 315 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Erap1Q9EQH2 930 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Acsl4Q9QUJ7 711 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Camta1A2A891 1682 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Gm45208A0A140LJ36 292 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Slc27a2O35488 620 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Krt2Q3TTY5 707 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Olfr1057Q7TR75 315 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Ints6lQ8BND4 861 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Haus3Q8QZX2 570 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Angel1Q8VCU0 667 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Abt1Q9QYL7 269 aaKnown RBP17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Krt6bQ9Z331 562 aa17.27■□□□□ 0.36
Usp47-201ENSMUST00000106653 Drg1P32233 367 aaKnown RBP17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Slc1a2P43006 572 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Tbx1P70323 479 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Bpifb5Q3UQ05 490 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 R3hdm4Q4VBF2 262 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Kcnj11Q61743 390 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Sh3gl3Q62421 347 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Mrpl1Q99N96 336 aaKnown RBP17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Magea10A2AMW4 325 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Hes2O54792 157 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Ppp3caP63328 521 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Map3k6Q9WTR2 1291 aa17.27■□□□□ 0.35
Usp47-201ENSMUST00000106653 Znf804aA2AKY4 1200 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Skint3A7TZF0 458 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Shoc2O88520 582 aaKnown RBP17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Csf1rP09581 977 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Slc44a2Q8BY89 706 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Slc39a3Q99K24 317 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Cyp2c55Q9D816 490 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Pramef20B1ARV6 477 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Vmn2r39L7N2E5 861 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Itga4Q00651 1039 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Tas2r131Q7M708 310 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Nipal1Q8BMW7 416 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Vmn1r203Q8R273 311 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Slf1Q8R3P9 1054 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Bap1Q99PU7 728 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Rnf181Q9CY62 165 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Ubr1O70481 1757 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Oas1eA0A0J9YV76 386 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Cyp2b10P12791 500 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Epas1P97481 874 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 ScinQ60604 715 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Olfr412Q7TRW7 312 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Fbxl21Q8BFZ4 434 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Gprc5aQ8BHL4 356 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Setdb2Q8C267 713 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Dpp3Q99KK7 738 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Yaf2Q99LW6 179 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Med21Q9CQ39 144 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Tmem86aQ9D8N3 241 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Zscan12Q9Z1D7 501 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Kcnq2Q9Z351 759 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Cylc2B1AWN8 422 aa17.26■□□□□ 0.35
Usp47-201ENSMUST00000106653 Erich1E9PY43 332 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms