RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tnfaip1O70479 316 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Abi2P62484 446 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Cntn2Q61330 1040 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Olfr1415Q7TQS4 311 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Znf689Q8BKK5 500 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ankrd52Q8BTI7 1076 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 E330017A01RikQ8BU47 192 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 C130026I21RikQ8C898 291 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Kat14Q8CID0 779 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Olfr1416Q8VGU4 312 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Epn3Q91W69 636 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Thumpd2Q9CZB3 528 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Q9D9D9 101 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Rassf7Q9DD19 359 aa23.85■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Igkv18-36A0A075B5M9 114 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 DgkdE9PUQ8 1220 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Sypl2O89104 264 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Itgb1P09055 798 aaKnown RBP23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Vav1P27870 845 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Arpp19P56212 112 aaKnown RBP23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Slc26a1P58735 704 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Runx2Q08775 607 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Znf771Q8BJ90 317 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Mageb18Q8BQR7 327 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ftsj1Q8CBC7 324 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 DeraQ91YP3 318 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 GatmQ9D964 423 aaKnown RBP23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 GabrqQ9JLF1 638 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Acox2Q9QXD1 681 aa23.84■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ighv11-2A0A075B5R8 117 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Daw1D3Z7A5 415 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ctnnal1O88327 731 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 P01878 344 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Lsp1P19973 330 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Fam171bQ14CH0 825 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 B020004J07RikQ3UTC0 476 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Zdhhc24Q6IR37 284 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Apol9bQ8C7I4 310 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Rassf9Q8K342 435 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Apol9aQ8VDU3 310 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Slc12a6Q924N4 1150 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Psmg1Q9JK23 289 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Pbx2O35984 430 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ncf2O70145 525 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 RalaP63321 206 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Tspyl3Q3UYP3 334 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 MyorgQ69ZQ1 716 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Ntrk3Q6VNS1 825 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Akap7Q7TN79 314 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Sytl5Q80T23 753 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Impg2Q80XH2 1243 aa23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Pwp2Q8BU03 919 aaKnown RBP23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Lsm14bQ8CGC4 385 aaKnown RBP23.83■■□□□ 1.41
Upf3a-201ENSMUST00000043767 Col4a6B1AVK5 1691 aa23.83■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Atg2aQ6P4T0 1914 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 DgkiD3YWQ0 1071 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Apold1E9Q0X2 246 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Klc1O88447 541 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Pgk1P09411 417 aaKnown RBP23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Hoxd8P23463 289 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 HpdP49429 393 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Fam172aQ3TNH5 417 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Gabbr2Q80T41 940 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Sh3tc2Q80VA5 1289 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Fam228aQ8CDW1 299 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Ugt3a2Q8JZZ0 523 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Synpo2Q91YE8 1087 aaKnown RBP23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Gps2Q921N8 327 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Fam173bQ9D1Z3 247 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Abcg8Q9DBM0 673 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Scamp5Q9JKD3 235 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Cntnap3E9PY62 1287 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 ChkbO55229 394 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Pkn1P70268 946 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Serpina5P70458 405 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Fut7Q11131 389 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Mapre1Q61166 268 aaKnown RBP23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Six1Q62231 284 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Tspyl5Q69ZB3 406 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Cpa4Q6P8K8 420 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 DstykQ6XUX1 927 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Cfap36Q8C6E0 343 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Apol7cQ8C6E1 369 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Lgi2Q8K4Z0 550 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 MtrexQ9CZU3 1040 aaKnown RBP23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Atad1Q9D5T0 361 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 MajinQ9D992 256 aa23.82■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Fam81bA0A140LI28 432 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Kcnt2D3Z649 1135 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Serpinb6Q60854 378 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Bank1Q80VH0 783 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 ToporsQ80Z37 1033 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Slitrk1Q810C1 696 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Nlrp4aQ8BU40 982 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Zbtb9Q8CDC7 459 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Hip1Q8VD75 1029 aaKnown RBP23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Pcdhb19Q91Y01 801 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Erap1Q9EQH2 930 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 Trpc2Q9R244 1172 aa23.81■■□□□ 1.4
Upf3a-201ENSMUST00000043767 IqccA2ADZ8 418 aa23.8■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms