RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ugt2a1Q80X89 528 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cops7bQ8BV13 264 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Anapc2Q8BZQ7 837 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ribc2Q9D4Q1 309 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Copg1Q9QZE5 874 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pramef20B1ARV6 477 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Siah3B2RWG3 268 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Oog1E9Q5G7 496 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam120bQ6RI63 786 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 MrrfQ9D6S7 262 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Erap1Q9EQH2 930 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ruvbl2Q9WTM5 463 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r87E9PZX4 848 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc27a6E9Q9W4 619 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rgsl1H3BL40 1073 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Psma3O70435 255 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mt-CybP00158 381 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 NyxP83503 476 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm4951Q3UED7 406 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam196bQ6GQV1 535 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pip5kl1Q6U7H8 395 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr792Q7TRH9 311 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 4932414N04RikQ8CEQ9 752 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gtse1Q8R080 741 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Eif2b2Q99LD9 351 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sike1Q9CPR7 207 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sh2b2Q9JID9 621 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 RptorQ8K4Q0 1335 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Clrn2B2RVW2 232 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Qtrt2B8ZXI1 415 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 DcxO88809 366 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Lmnb1P14733 588 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nedd8P29595 81 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rpusd2Q149F1 553 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Foxn1Q61575 648 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Exoc3l4Q6DIA2 721 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nudt16Q6P3D0 195 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pqlc1Q80XM9 271 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tspan9Q8BJU2 239 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Samd4aQ8CBY1 711 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Colgalt1Q8K297 617 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr395Q8VGR3 312 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pla2g12bQ99P27 195 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Emc2Q9CRD2 297 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ddx21Q9JIK5 851 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mettl1Q9Z120 268 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dip2aQ8BWT5 1523 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Klhl18A0A0G2JGN5 579 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 D830030K20RikE9PYQ5 218 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm3043K7N693 218 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 MrasO08989 208 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 GemP55041 295 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zswim6Q80TB7 1207 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mup21Q80YX8 181 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rab15Q8K386 212 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mcm8Q9CWV1 833 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ankef1Q9D2J7 775 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PrameQ9D4Z5 464 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mindy4b-psA0A1W2P7H6 457 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Defa8P50706 81 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Scn1bP97952 218 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Itga4Q00651 1039 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pih1d3Q3KNI6 218 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nlrc4Q3UP24 1024 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kcna5Q61762 602 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Wee2Q66JT0 555 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kiaa1841Q68FF0 718 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Egfl8Q6GUQ1 293 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rmnd5aQ80YQ8 391 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Senp7Q8BUH8 1037 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn1r213Q8R278 384 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mrpl1Q99N96 336 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tssk3Q9D2E1 268 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ddx39bQ9Z1N5 428 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Prkg1P0C605 671 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Art3Q8R2G4 371 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ccdc59Q8R2N0 240 aaKnown RBP10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 DolkQ8R2Y3 534 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sec14l2Q99J08 403 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Med24Q99K74 987 aa10.44□□□□□ -0.74
Ubr1-201ENSMUST00000028728 2210011C24RikA0A087WQ89 206 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Bmpr2O35607 1038 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CebpaP53566 359 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ankrd42Q3V096 527 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mical2Q8BML1 960 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hus1Q8BQY8 280 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Abi1Q8CBW3 481 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 MutyhQ99P21 515 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pgm3Q9CYR6 542 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Q9D937 123 aaKnown RBP10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Plcg1Q62077 1302 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r74E9PW21 853 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sult1e1P49891 295 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Frg1P97376 258 aaKnown RBP10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 E2f5Q61502 335 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rexo4Q6PAQ4 432 aaKnown RBP10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rnf220Q6PDX6 566 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Retreg1dQ8VE91 480 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pkp2Q9CQ73 795 aaKnown RBP10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Osbpl10S4R1M9 766 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms