RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 GOLGA7BQ9D428 167 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Fam3aQ9D8T0 230 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Iigp1Q9QZ85 413 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ror2Q9Z138 944 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 TfgQ9Z1A1 397 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Chil3O35744 398 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 ItgavP43406 1044 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Zfp454Q80Y34 536 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Zdhhc3Q8R173 299 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tekt2Q922G7 430 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 MrgbpQ9DAT2 204 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Chrac1Q9JKP8 129 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Acp4D3YTS9 425 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccnyl1D3YUJ3 367 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Olfr67F8VPJ8 320 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Chrna1P04756 457 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gsta4P24472 222 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tgfb2P27090 414 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 PrkcdP28867 674 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gata5P97489 404 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Xlr3cQ61806 226 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Atp4aQ64436 1033 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Mtmr10Q7TPM9 771 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccdc40Q8BI79 1192 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Atg16l1Q8C0J2 607 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ppp1r16bQ8VHQ3 568 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Dis3Q9CSH3 958 aaKnown RBP19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ptpn4Q9WU22 926 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Krt27Q9Z320 448 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Abhd12bG3UZN6 359 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Edil3O35474 480 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 RpsaP14206 295 aaKnown RBP19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gja8P28236 440 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Dlg3P70175 849 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Serpina6Q06770 397 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gm8773Q3UQ24 132 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Stxbp5lQ5DQR4 1185 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Papss1Q60967 624 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 GapdhsQ64467 440 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Eif2aQ8BJW6 581 aaKnown RBP19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Snx30Q8CE50 437 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 SncaipQ99ME3 962 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tas1r1Q99PG6 842 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Atg7Q9D906 698 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Mpp5Q9JLB2 675 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Speer3W4VSP1 261 aa19.41■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Disp2Q8CIP5 1345 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gm7086A0A1W2P766 342 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 PotegA5H0M4 473 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 PdgfaP20033 211 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Lrrc14bQ3UJB3 510 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 RfflQ6ZQM0 377 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Dnajc6Q80TZ3 938 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ttc39bQ8BYY4 617 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Lpin3Q99PI4 848 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Top3bQ9Z321 862 aaKnown RBP19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Cntnap5aQ0V8T9 1304 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 1700031M16RikA0A087WSH0 82 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Sh3pxd2bA2AAY5 908 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Galnt4O08832 578 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 UmpsP13439 481 aaKnown RBP19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Slc10a3P21129 473 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Pdha1P35486 390 aaKnown RBP19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 PfkmP47857 780 aaKnown RBP19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 LeprP48356 1162 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 NcstnP57716 708 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Arf4P61750 180 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Pdss1Q33DR2 409 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Slc38a5Q3U1J0 479 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gm10392Q3V3I3 114 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tcaf3Q6QR59 914 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Arhgap15Q811M1 481 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Hdac7Q8C2B3 938 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Zfp62Q8C827 914 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Mkl1Q8K4J6 964 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Nudcd3Q8R1N4 363 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Commd8Q9CZG3 183 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Abcg8Q9DBM0 673 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccr10Q9JL21 362 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Dnajc12Q9R022 198 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Trpv2Q9WTR1 756 aa19.4■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Olfr271-ps1A0A1L1SQH2 283 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Tcp11x2A2AEI7 503 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Top6blJ3QMY9 579 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 FlgP11088 336 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 SnnP61807 88 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Marveld2Q3UZP0 555 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Kctd8Q50H33 476 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Scaf4Q6PFF0 1209 aaKnown RBP19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Cand2Q6ZQ73 1235 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 BoraQ8BS90 525 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Tfb1mQ8JZM0 345 aaKnown RBP19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Arhgap18Q8K0Q5 663 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Ccdc80Q8R2G6 949 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Prpsap2Q8R574 369 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Alg9Q8VDI9 611 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Rabep2Q91WG2 554 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Pcyox1Q9CQF9 505 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Eif4e3Q9DBB5 207 aa19.39■□□□□ 0.69
Shkbp1-201ENSMUST00000003857 Vmn2r25W4VSP2 855 aa19.39■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms