RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Duoxa2Q9D311 320 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dnaja4Q9JMC3 397 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mroh4G3X8W1 983 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mtnd2P03893 345 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ChgbP16014 677 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Lrpap1P55302 360 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hnrnph2P70333 449 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ptcd3Q14C51 685 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zc3h15Q3TIV5 426 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Phc1Q64028 1012 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 SpidrQ8BGX7 933 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ttc39bQ8BYY4 617 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Anapc2Q8BZQ7 837 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mis18aQ9CZJ6 204 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmem79Q9D709 391 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Arhgap33Q80YF9 1305 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 1700017N19RikA0A087WPJ1 469 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pcdh7A0A0A6YY83 1255 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Etnk2A7MCT6 385 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr414E9Q5P8 317 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GclmO09172 274 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mcpt4P21812 246 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Prox1P48437 737 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cacnb3P54285 484 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dppa5bP85965 119 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 HelqQ2VPA6 1069 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cdkl4Q3TZA2 342 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Smcr8Q3UMB5 935 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Usp50Q6P8X6 390 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gpr139Q80UC8 345 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ankzf1Q80UU1 748 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kank2Q8BX02 843 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Scara3Q8C850 606 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Angel1Q8VCU0 667 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MutyhQ99P21 515 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Lrrc40Q9CRC8 602 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rnaseh2aQ9CWY8 301 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tjp2Q9Z0U1 1167 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Stk25Q9Z2W1 426 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Arhgef10Q8C033 1345 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Celf5D3Z4T1 395 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 XntrpcF8VQM8 1264 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ncam2O35136 837 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 WapP01173 134 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Klra1P20937 262 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp19a1P28649 503 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ProcP33587 460 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cdca2Q14B71 982 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Otud5Q3U2S4 566 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gstt1Q64471 240 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nox1Q8CIZ9 591 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Colgalt1Q8K297 617 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ClyblQ8R4N0 338 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tesk2Q8VCT9 570 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr615Q8VGY4 313 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hkdc1Q91W97 915 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nrif2Q921B4 824 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mrpl9Q99N94 265 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kif12Q9D2Z8 642 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q9D9D9 101 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Trpc4apQ9JLV2 797 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Trpc2Q9R244 1172 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Itsn2Q9Z0R6 1659 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tbkbp1A2A9T0 611 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tnk2O54967 1055 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 JundP15066 341 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rag1P15919 1040 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ZufspQ3T9Z9 577 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Plekha6Q7TQG1 1173 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Adamts12Q811B3 1600 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pgs1Q8BHF7 553 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rsl1d1Q8BVY0 452 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Spdye4bQ8CDE8 236 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ssh3Q8K330 649 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 RorbQ8R1B8 470 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Irak4Q8R4K2 459 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kcnh7Q9ER47 1195 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ropn1Q9ESG2 212 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tulp4Q9JIL5 1547 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfp984A2A7A2 547 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp2c69E9PXC3 491 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm12794L7MTS5 483 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rtn2O70622 471 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Grm1P97772 1199 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ica1lQ3TY65 431 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hesx1Q61658 185 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Aldh1a2Q62148 518 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 TsnQ62348 228 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Atg16l2Q6KAU8 623 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tnpo3Q6P2B1 923 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tas2r115Q7M719 310 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q8BWQ6 963 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CenpxQ8C4X1 78 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rwdd4Q9CPR1 188 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ninj2Q9JL89 143 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ercc4Q9QZD4 917 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Stau1Q9Z108 487 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PfasQ5SUR0 1337 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm28168A0A087WNP1 180 aa9.42□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ripor3A1L3T7 938 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms