RNA–Protein interactions for RNA: snR34

snR34, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR34, Length 203 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR34snR34 YIL102C-AQ2V2P5 75 aa-3.63□□□□□ -2.99
snR34snR34 YOR093CQ12275 1648 aa-3.69□□□□□ -3
snR34snR34 TCB3Q03640 1545 aaKnown RBP-3.7□□□□□ -3
snR34snR34 THO2P53552 1597 aaKnown RBP-3.78□□□□□ -3.01
snR34snR34 MYO4P32492 1471 aa-3.83□□□□□ -3.02
snR34snR34 Q0017Q9ZZX8 53 aa-3.93□□□□□ -3.04
snR34snR34 YOR192C-CQ3E736 78 aa-3.97□□□□□ -3.04
snR34snR34 PDR5P33302 1511 aaKnown RBP-4.16□□□□□ -3.08
snR34snR34 YOR316C-AQ3E806 69 aa-4.19□□□□□ -3.08
snR34snR34 YPR010C-AA5Z2X5 72 aa-4.21□□□□□ -3.08
snR34snR34 YCF1P39109 1515 aaKnown RBP-4.22□□□□□ -3.09
snR34snR34 YBT1P32386 1661 aa-4.22□□□□□ -3.09
snR34snR34 YDR034C-AP0C289 58 aa-4.26□□□□□ -3.09
snR34snR34 CSF1Q12150 2958 aa-4.29□□□□□ -3.1
snR34snR34 FLO1P32768 1537 aa-4.31□□□□□ -3.1
snR34snR34 YML054C-AQ3E809 52 aa-4.32□□□□□ -3.1
snR34snR34 RPL29P05747 59 aaPredicted RBP-4.33□□□□□ -3.1
snR34snR34 VMA9Q3E7B6 73 aa-4.37□□□□□ -3.11
snR34snR34 CUP1-1P0CX80 61 aa-4.38□□□□□ -3.11
snR34snR34 CUP1-2P0CX81 61 aa-4.38□□□□□ -3.11
snR34snR34 NUP188P52593 1655 aaKnown RBP-4.45□□□□□ -3.12
snR34snR34 YKL023C-AQ2V2P3 75 aa-4.54□□□□□ -3.14
snR34snR34 TRA1P38811 3744 aa-4.59□□□□□ -3.14
snR34snR34 SSK2P53599 1579 aa-4.62□□□□□ -3.15
snR34snR34 BUD3P25558 1636 aa-4.64□□□□□ -3.15
snR34snR34 YFR010W-AP0C5N0 62 aa-4.79□□□□□ -3.18
snR34snR34 GCN2P15442 1659 aa-4.81□□□□□ -3.18
snR34snR34 ATG2P53855 1592 aa-4.82□□□□□ -3.18
snR34snR34 IRA1P18963 3092 aa-4.85□□□□□ -3.19
snR34snR34 CDC25P04821 1589 aa-4.92□□□□□ -3.2
snR34snR34 STU1P38198 1513 aa-4.93□□□□□ -3.2
snR34snR34 NUM1Q00402 2748 aa-5.02□□□□□ -3.21
snR34snR34 DDR2P89113 61 aa-5.04□□□□□ -3.22
snR34snR34 YJL133C-AQ3E7A3 74 aa-5.05□□□□□ -3.22
snR34snR34 USO1P25386 1790 aa-5.08□□□□□ -3.22
snR34snR34 NUP192P47054 1683 aa-5.08□□□□□ -3.22
snR34snR34 COX9P07255 59 aa-5.11□□□□□ -3.23
snR34snR34 NUP170P38181 1502 aa-5.13□□□□□ -3.23
snR34snR34 YHR073W-AP0C5N7 58 aa-5.22□□□□□ -3.25
snR34snR34 HIR3P47171 1648 aa-5.28□□□□□ -3.25
snR34snR34 YMR105W-AQ8TGS8 64 aa-5.3□□□□□ -3.26
snR34snR34 PEP1P32319 1579 aa-5.32□□□□□ -3.26
snR34snR34 IRA2P19158 3079 aa-5.33□□□□□ -3.26
snR34snR34 SPT6P23615 1451 aaKnown RBP-5.34□□□□□ -3.26
snR34snR34 YLR342W-AQ3E810 57 aa-5.37□□□□□ -3.27
snR34snR34 ULS1Q08562 1619 aa-5.5□□□□□ -3.29
snR34snR34 RKR1Q04781 1562 aa-5.62□□□□□ -3.31
snR34snR34 VPS13Q07878 3144 aa-5.79□□□□□ -3.34
snR34snR34 YJL127C-BQ3E828 52 aa-5.85□□□□□ -3.35
snR34snR34 MON2P48563 1636 aaPredicted RBP-6□□□□□ -3.37
snR34snR34 SMX2P40204 77 aaKnown RBP-6.17□□□□□ -3.4
snR34snR34 PMP3P87284 55 aa-6.33□□□□□ -3.42
snR34snR34 HOR7Q05827 59 aa-6.83□□□□□ -3.5
snR34snR34 CHC1P22137 1653 aaKnown RBP-6.87□□□□□ -3.51
snR34snR34 YLL066W-BQ8TGJ7 56 aa-6.96□□□□□ -3.52
snR34snR34 TOM7P53507 60 aa-7.35□□□□□ -3.59
snR34snR34 MLP2P40457 1679 aa-7.38□□□□□ -3.59
snR34snR34 NCE101Q02820 53 aa-8.39□□□□□ -3.75
snR34snR34 TOM1Q03280 3268 aa-8.42□□□□□ -3.76
snR34snR34 RPL39P04650 51 aa-9.73□□□□□ -3.97
snR34snR34 Q0297Q9ZZV8 51 aa-10.79□□□□□ -4.14
snR34snR34 YIL046W-AQ3E7Z4 54 aa-11.2□□□□□ -4.2
snR34snR34 YDR034W-BQ6Q5X2 51 aa-14.91□□□□□ -4.8
Retrieved 63 of 5,963 RNA–protein pairs in 13.3 ms