RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	PDR5	P33302	1511 aa	Known RBP	0.51	□□□□□ -2.33
CTR9	YOL145C	CHC1	P22137	1653 aa	Known RBP	0.51	□□□□□ -2.33
CTR9	YOL145C	APC1	P53886	1748 aa		0.51	□□□□□ -2.33
CTR9	YOL145C	YPR010C-A	A5Z2X5	72 aa		0.5	□□□□□ -2.33
CTR9	YOL145C	RPS27B	P38711	82 aa		0.5	□□□□□ -2.33
CTR9	YOL145C	PDR12	Q02785	1511 aa		0.5	□□□□□ -2.33
CTR9	YOL145C	ARO1	P08566	1588 aa	Known RBP	0.49	□□□□□ -2.33
CTR9	YOL145C	RPO21	P04050	1733 aa	Known RBP	0.49	□□□□□ -2.33
CTR9	YOL145C	YGR146C-A	Q8TGT9	53 aa		0.48	□□□□□ -2.33
CTR9	YOL145C	YCF1	P39109	1515 aa	Known RBP	0.48	□□□□□ -2.33
CTR9	YOL145C	RPS29B	P41058	56 aa	Known RBP	0.48	□□□□□ -2.33
CTR9	YOL145C	TOS6	P48560	102 aa		0.48	□□□□□ -2.33
CTR9	YOL145C	YBR230W-A	Q3E762	66 aa		0.48	□□□□□ -2.33
CTR9	YOL145C	YLL006W-A	Q3E814	58 aa		0.48	□□□□□ -2.33
CTR9	YOL145C	YOR008C-A	Q3E7B9	74 aa		0.47	□□□□□ -2.33
CTR9	YOL145C	ULS1	Q08562	1619 aa		0.47	□□□□□ -2.33
CTR9	YOL145C	BCK1	Q01389	1478 aa		0.46	□□□□□ -2.34
CTR9	YOL145C	CSF1	Q12150	2958 aa		0.46	□□□□□ -2.34
CTR9	YOL145C	YGL258W-A	Q3E740	77 aa		0.46	□□□□□ -2.34
CTR9	YOL145C	PEP1	P32319	1579 aa		0.46	□□□□□ -2.34
CTR9	YOL145C	YBT1	P32386	1661 aa		0.44	□□□□□ -2.34
CTR9	YOL145C	VMR1	P38735	1592 aa		0.43	□□□□□ -2.34
CTR9	YOL145C	SMX2	P40204	77 aa	Known RBP	0.43	□□□□□ -2.34
CTR9	YOL145C	SPO14	P36126	1683 aa		0.42	□□□□□ -2.34
CTR9	YOL145C	STU1	P38198	1513 aa		0.41	□□□□□ -2.34
CTR9	YOL145C	USO1	P25386	1790 aa		0.4	□□□□□ -2.34
CTR9	YOL145C	YLR342W-A	Q3E810	57 aa		0.4	□□□□□ -2.34
CTR9	YOL145C	YJL133C-A	Q3E7A3	74 aa		0.4	□□□□□ -2.35
CTR9	YOL145C	YOR072W-B	Q3E832	53 aa		0.4	□□□□□ -2.35
CTR9	YOL145C	NUP188	P52593	1655 aa	Known RBP	0.39	□□□□□ -2.35
CTR9	YOL145C	NUP192	P47054	1683 aa		0.37	□□□□□ -2.35
CTR9	YOL145C	NUP170	P38181	1502 aa		0.37	□□□□□ -2.35
CTR9	YOL145C	COA2	Q3E823	68 aa		0.36	□□□□□ -2.35
CTR9	YOL145C	RKR1	Q04781	1562 aa		0.36	□□□□□ -2.35
CTR9	YOL145C	TOM7	P53507	60 aa		0.34	□□□□□ -2.36
CTR9	YOL145C	YOR316C-A	Q3E806	69 aa		0.34	□□□□□ -2.36
CTR9	YOL145C	COX9	P07255	59 aa		0.33	□□□□□ -2.36
CTR9	YOL145C	ATG2	P53855	1592 aa		0.33	□□□□□ -2.36
CTR9	YOL145C	TRA1	P38811	3744 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	DDR2	P89113	61 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	YDR524C-B	Q3E6R4	66 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	FIG2	P25653	1609 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	BUD3	P25558	1636 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	YDR034C-A	P0C289	58 aa		0.32	□□□□□ -2.36
CTR9	YOL145C	YJL127C-B	Q3E828	52 aa		0.31	□□□□□ -2.36
CTR9	YOL145C	RPS29A	P41057	56 aa	Known RBP	0.3	□□□□□ -2.36
CTR9	YOL145C	GCN2	P15442	1659 aa		0.29	□□□□□ -2.36
CTR9	YOL145C	RPL29	P05747	59 aa	Predicted RBP	0.28	□□□□□ -2.36
CTR9	YOL145C	YHR050W-A	Q05451	56 aa		0.26	□□□□□ -2.37
CTR9	YOL145C	MLP2	P40457	1679 aa		0.25	□□□□□ -2.37
CTR9	YOL145C	YDR034W-B	Q6Q5X2	51 aa		0.24	□□□□□ -2.37
CTR9	YOL145C	FLO1	P32768	1537 aa		0.24	□□□□□ -2.37
CTR9	YOL145C	YHR073W-A	P0C5N7	58 aa		0.21	□□□□□ -2.38
CTR9	YOL145C	Q0017	Q9ZZX8	53 aa		0.21	□□□□□ -2.38
CTR9	YOL145C	PMP3	P87284	55 aa		0.19	□□□□□ -2.38
CTR9	YOL145C	YML054C-A	Q3E809	52 aa		0.19	□□□□□ -2.38
CTR9	YOL145C	NCE101	Q02820	53 aa		0.12	□□□□□ -2.39
CTR9	YOL145C	HOR7	Q05827	59 aa		0.12	□□□□□ -2.39
CTR9	YOL145C	RPL39	P04650	51 aa		0.01	□□□□□ -2.41
CTR9	YOL145C	YLL066W-B	Q8TGJ7	56 aa		0.01	□□□□□ -2.41
CTR9	YOL145C	YMR105W-A	Q8TGS8	64 aa		0.01	□□□□□ -2.41
CTR9	YOL145C	YIL046W-A	Q3E7Z4	54 aa		-0.17	□□□□□ -2.44
CTR9	YOL145C	Q0297	Q9ZZV8	51 aa		-0.21	□□□□□ -2.44

Retrieved 63 of 5,963 RNA–protein pairs in 15.1 ms