RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W FIG2P25653 1609 aa-1.58□□□□□ -2.66
SMD2YLR275W YOR093CQ12275 1648 aa-1.58□□□□□ -2.66
SMD2YLR275W THO2P53552 1597 aaKnown RBP-1.68□□□□□ -2.68
SMD2YLR275W MDN1Q12019 4910 aaKnown RBP-1.7□□□□□ -2.68
SMD2YLR275W YOR192C-CQ3E736 78 aa-1.7□□□□□ -2.68
SMD2YLR275W VMA9Q3E7B6 73 aa-1.73□□□□□ -2.69
SMD2YLR275W Q0017Q9ZZX8 53 aa-1.76□□□□□ -2.69
SMD2YLR275W GCN1P33892 2672 aaKnown RBP-1.78□□□□□ -2.69
SMD2YLR275W YPR010C-AA5Z2X5 72 aa-1.78□□□□□ -2.69
SMD2YLR275W PDR5P33302 1511 aaKnown RBP-1.81□□□□□ -2.7
SMD2YLR275W YOR316C-AQ3E806 69 aa-1.81□□□□□ -2.7
SMD2YLR275W YCF1P39109 1515 aaKnown RBP-1.81□□□□□ -2.7
SMD2YLR275W YKL023C-AQ2V2P3 75 aa-1.85□□□□□ -2.71
SMD2YLR275W YBT1P32386 1661 aa-1.86□□□□□ -2.71
SMD2YLR275W YDR034C-AP0C289 58 aa-1.88□□□□□ -2.71
SMD2YLR275W FLO1P32768 1537 aa-1.92□□□□□ -2.72
SMD2YLR275W RPL29P05747 59 aaPredicted RBP-1.93□□□□□ -2.72
SMD2YLR275W YFR010W-AP0C5N0 62 aa-1.93□□□□□ -2.72
SMD2YLR275W YML054C-AQ3E809 52 aa-1.93□□□□□ -2.72
SMD2YLR275W NUP188P52593 1655 aaKnown RBP-2□□□□□ -2.73
SMD2YLR275W BUD3P25558 1636 aa-2.04□□□□□ -2.74
SMD2YLR275W CUP1-1P0CX80 61 aa-2.05□□□□□ -2.74
SMD2YLR275W CUP1-2P0CX81 61 aa-2.05□□□□□ -2.74
SMD2YLR275W SSK2P53599 1579 aa-2.09□□□□□ -2.74
SMD2YLR275W CDC25P04821 1589 aa-2.11□□□□□ -2.75
SMD2YLR275W CSF1Q12150 2958 aa-2.11□□□□□ -2.75
SMD2YLR275W ATG2P53855 1592 aa-2.14□□□□□ -2.75
SMD2YLR275W STU1P38198 1513 aa-2.2□□□□□ -2.76
SMD2YLR275W GCN2P15442 1659 aa-2.2□□□□□ -2.76
SMD2YLR275W COX9P07255 59 aa-2.22□□□□□ -2.76
SMD2YLR275W DDR2P89113 61 aa-2.22□□□□□ -2.76
SMD2YLR275W NUP170P38181 1502 aa-2.23□□□□□ -2.77
SMD2YLR275W NUP192P47054 1683 aa-2.24□□□□□ -2.77
SMD2YLR275W USO1P25386 1790 aa-2.26□□□□□ -2.77
SMD2YLR275W SPT6P23615 1451 aaKnown RBP-2.26□□□□□ -2.77
SMD2YLR275W YJL133C-AQ3E7A3 74 aa-2.27□□□□□ -2.77
SMD2YLR275W TRA1P38811 3744 aa-2.28□□□□□ -2.77
SMD2YLR275W PEP1P32319 1579 aa-2.33□□□□□ -2.78
SMD2YLR275W YHR073W-AP0C5N7 58 aa-2.35□□□□□ -2.79
SMD2YLR275W YLR342W-AQ3E810 57 aa-2.37□□□□□ -2.79
SMD2YLR275W IRA1P18963 3092 aa-2.38□□□□□ -2.79
SMD2YLR275W HIR3P47171 1648 aa-2.4□□□□□ -2.79
SMD2YLR275W NUM1Q00402 2748 aa-2.43□□□□□ -2.8
SMD2YLR275W ULS1Q08562 1619 aa-2.47□□□□□ -2.81
SMD2YLR275W YMR105W-AQ8TGS8 64 aa-2.48□□□□□ -2.81
SMD2YLR275W RKR1Q04781 1562 aa-2.49□□□□□ -2.81
SMD2YLR275W IRA2P19158 3079 aa-2.54□□□□□ -2.82
SMD2YLR275W MON2P48563 1636 aaPredicted RBP-2.6□□□□□ -2.83
SMD2YLR275W YJL127C-BQ3E828 52 aa-2.64□□□□□ -2.83
SMD2YLR275W SMX2P40204 77 aaKnown RBP-2.76□□□□□ -2.85
SMD2YLR275W VPS13Q07878 3144 aa-2.88□□□□□ -2.87
SMD2YLR275W PMP3P87284 55 aa-2.9□□□□□ -2.87
SMD2YLR275W HOR7Q05827 59 aa-3.14□□□□□ -2.91
SMD2YLR275W CHC1P22137 1653 aaKnown RBP-3.21□□□□□ -2.92
SMD2YLR275W YLL066W-BQ8TGJ7 56 aa-3.28□□□□□ -2.93
SMD2YLR275W TOM7P53507 60 aa-3.37□□□□□ -2.95
SMD2YLR275W MLP2P40457 1679 aa-3.48□□□□□ -2.97
SMD2YLR275W TOM1Q03280 3268 aa-3.7□□□□□ -3
SMD2YLR275W NCE101Q02820 53 aa-3.92□□□□□ -3.04
SMD2YLR275W RPL39P04650 51 aa-4.66□□□□□ -3.16
SMD2YLR275W Q0297Q9ZZV8 51 aa-5.08□□□□□ -3.22
SMD2YLR275W YIL046W-AQ3E7Z4 54 aa-5.37□□□□□ -3.27
SMD2YLR275W YDR034W-BQ6Q5X2 51 aa-6.44□□□□□ -3.44
Retrieved 63 of 5,963 RNA–protein pairs in 11.2 ms