RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W VMA9Q3E7B6 73 aa-0.24□□□□□ -2.45
SLX4YLR135W YOR192C-CQ3E736 78 aa-0.26□□□□□ -2.45
SLX4YLR135W YOR093CQ12275 1648 aa-0.27□□□□□ -2.45
SLX4YLR135W NUM1Q00402 2748 aa-0.27□□□□□ -2.45
SLX4YLR135W YBT1P32386 1661 aa-0.28□□□□□ -2.45
SLX4YLR135W DYN1P36022 4092 aa-0.29□□□□□ -2.46
SLX4YLR135W YFR010W-AP0C5N0 62 aa-0.29□□□□□ -2.46
SLX4YLR135W FIG2P25653 1609 aa-0.3□□□□□ -2.46
SLX4YLR135W YCF1P39109 1515 aaKnown RBP-0.3□□□□□ -2.46
SLX4YLR135W YPR010C-AA5Z2X5 72 aa-0.31□□□□□ -2.46
SLX4YLR135W YKL023C-AQ2V2P3 75 aa-0.31□□□□□ -2.46
SLX4YLR135W PDR5P33302 1511 aaKnown RBP-0.33□□□□□ -2.46
SLX4YLR135W GCN1P33892 2672 aaKnown RBP-0.34□□□□□ -2.46
SLX4YLR135W CDC25P04821 1589 aa-0.34□□□□□ -2.46
SLX4YLR135W NUP188P52593 1655 aaKnown RBP-0.37□□□□□ -2.47
SLX4YLR135W THO2P53552 1597 aaKnown RBP-0.37□□□□□ -2.47
SLX4YLR135W YOR316C-AQ3E806 69 aa-0.37□□□□□ -2.47
SLX4YLR135W USO1P25386 1790 aa-0.38□□□□□ -2.47
SLX4YLR135W BUD3P25558 1636 aa-0.38□□□□□ -2.47
SLX4YLR135W YDR034C-AP0C289 58 aa-0.4□□□□□ -2.47
SLX4YLR135W CSF1Q12150 2958 aa-0.4□□□□□ -2.47
SLX4YLR135W Q0017Q9ZZX8 53 aa-0.4□□□□□ -2.47
SLX4YLR135W SSK2P53599 1579 aa-0.41□□□□□ -2.47
SLX4YLR135W GCN2P15442 1659 aa-0.41□□□□□ -2.48
SLX4YLR135W NUP192P47054 1683 aa-0.41□□□□□ -2.48
SLX4YLR135W SPT6P23615 1451 aaKnown RBP-0.42□□□□□ -2.48
SLX4YLR135W FLO1P32768 1537 aa-0.42□□□□□ -2.48
SLX4YLR135W RPL29P05747 59 aaPredicted RBP-0.42□□□□□ -2.48
SLX4YLR135W STU1P38198 1513 aa-0.43□□□□□ -2.48
SLX4YLR135W ATG2P53855 1592 aa-0.45□□□□□ -2.48
SLX4YLR135W YML054C-AQ3E809 52 aa-0.45□□□□□ -2.48
SLX4YLR135W HIR3P47171 1648 aa-0.46□□□□□ -2.48
SLX4YLR135W TRA1P38811 3744 aa-0.47□□□□□ -2.48
SLX4YLR135W NUP170P38181 1502 aa-0.47□□□□□ -2.49
SLX4YLR135W ULS1Q08562 1619 aa-0.48□□□□□ -2.49
SLX4YLR135W COX9P07255 59 aa-0.48□□□□□ -2.49
SLX4YLR135W CUP1-1P0CX80 61 aa-0.49□□□□□ -2.49
SLX4YLR135W CUP1-2P0CX81 61 aa-0.49□□□□□ -2.49
SLX4YLR135W YJL133C-AQ3E7A3 74 aa-0.49□□□□□ -2.49
SLX4YLR135W DDR2P89113 61 aa-0.49□□□□□ -2.49
SLX4YLR135W MON2P48563 1636 aaPredicted RBP-0.49□□□□□ -2.49
SLX4YLR135W RKR1Q04781 1562 aa-0.5□□□□□ -2.49
SLX4YLR135W IRA1P18963 3092 aa-0.5□□□□□ -2.49
SLX4YLR135W PEP1P32319 1579 aa-0.51□□□□□ -2.49
SLX4YLR135W YLR342W-AQ3E810 57 aa-0.52□□□□□ -2.49
SLX4YLR135W YHR073W-AP0C5N7 58 aa-0.58□□□□□ -2.5
SLX4YLR135W IRA2P19158 3079 aa-0.59□□□□□ -2.5
SLX4YLR135W YJL127C-BQ3E828 52 aa-0.63□□□□□ -2.51
SLX4YLR135W VPS13Q07878 3144 aa-0.65□□□□□ -2.51
SLX4YLR135W SMX2P40204 77 aaKnown RBP-0.65□□□□□ -2.51
SLX4YLR135W YMR105W-AQ8TGS8 64 aa-0.66□□□□□ -2.51
SLX4YLR135W PMP3P87284 55 aa-0.73□□□□□ -2.53
SLX4YLR135W CHC1P22137 1653 aaKnown RBP-0.77□□□□□ -2.53
SLX4YLR135W HOR7Q05827 59 aa-0.84□□□□□ -2.54
SLX4YLR135W MLP2P40457 1679 aa-0.84□□□□□ -2.54
SLX4YLR135W TOM7P53507 60 aa-0.85□□□□□ -2.55
SLX4YLR135W YLL066W-BQ8TGJ7 56 aa-0.93□□□□□ -2.56
SLX4YLR135W TOM1Q03280 3268 aa-0.97□□□□□ -2.56
SLX4YLR135W NCE101Q02820 53 aa-1.08□□□□□ -2.58
SLX4YLR135W YDR034W-BQ6Q5X2 51 aa-1.2□□□□□ -2.6
SLX4YLR135W RPL39P04650 51 aa-1.3□□□□□ -2.62
SLX4YLR135W YIL046W-AQ3E7Z4 54 aa-1.46□□□□□ -2.64
SLX4YLR135W Q0297Q9ZZV8 51 aa-1.46□□□□□ -2.64
Retrieved 63 of 5,963 RNA–protein pairs in 17.8 ms