RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W YBR056W-AI2HB52 66 aa0.54□□□□□ -2.32
VMA5YKL080W UTP20P35194 2493 aaKnown RBP0.54□□□□□ -2.32
VMA5YKL080W YBT1P32386 1661 aa0.5□□□□□ -2.33
VMA5YKL080W COX9P07255 59 aa0.5□□□□□ -2.33
VMA5YKL080W TY1B-DR4Q07793 1604 aa0.49□□□□□ -2.33
VMA5YKL080W YOR093CQ12275 1648 aa0.48□□□□□ -2.33
VMA5YKL080W TOR1P35169 2470 aa0.46□□□□□ -2.34
VMA5YKL080W YOR316C-AQ3E806 69 aa0.45□□□□□ -2.34
VMA5YKL080W ULS1Q08562 1619 aa0.44□□□□□ -2.34
VMA5YKL080W YHR050W-AQ05451 56 aa0.42□□□□□ -2.34
VMA5YKL080W NUP170P38181 1502 aa0.41□□□□□ -2.34
VMA5YKL080W RKR1Q04781 1562 aa0.4□□□□□ -2.34
VMA5YKL080W NUP188P52593 1655 aaKnown RBP0.4□□□□□ -2.34
VMA5YKL080W PEP1P32319 1579 aa0.4□□□□□ -2.35
VMA5YKL080W STU1P38198 1513 aa0.39□□□□□ -2.35
VMA5YKL080W NUP192P47054 1683 aa0.39□□□□□ -2.35
VMA5YKL080W BUD3P25558 1636 aa0.37□□□□□ -2.35
VMA5YKL080W DDR2P89113 61 aa0.35□□□□□ -2.35
VMA5YKL080W YLR342W-AQ3E810 57 aa0.34□□□□□ -2.36
VMA5YKL080W USO1P25386 1790 aa0.34□□□□□ -2.36
VMA5YKL080W YDR034C-AP0C289 58 aa0.33□□□□□ -2.36
VMA5YKL080W YJL133C-AQ3E7A3 74 aa0.33□□□□□ -2.36
VMA5YKL080W ATG2P53855 1592 aa0.3□□□□□ -2.36
VMA5YKL080W NUM1Q00402 2748 aa0.29□□□□□ -2.36
VMA5YKL080W SMX2P40204 77 aaKnown RBP0.27□□□□□ -2.37
VMA5YKL080W HIR3P47171 1648 aa0.27□□□□□ -2.37
VMA5YKL080W THO2P53552 1597 aaKnown RBP0.26□□□□□ -2.37
VMA5YKL080W RPL29P05747 59 aaPredicted RBP0.25□□□□□ -2.37
VMA5YKL080W YPR117WQ06116 2489 aa0.24□□□□□ -2.37
VMA5YKL080W YML054C-AQ3E809 52 aa0.24□□□□□ -2.37
VMA5YKL080W Q0017Q9ZZX8 53 aa0.24□□□□□ -2.37
VMA5YKL080W MDN1Q12019 4910 aaKnown RBP0.23□□□□□ -2.37
VMA5YKL080W FLO1P32768 1537 aa0.22□□□□□ -2.37
VMA5YKL080W FIG2P25653 1609 aa0.2□□□□□ -2.38
VMA5YKL080W YHR073W-AP0C5N7 58 aa0.16□□□□□ -2.38
VMA5YKL080W FMP27Q06179 2628 aa0.16□□□□□ -2.38
VMA5YKL080W GCN2P15442 1659 aa0.14□□□□□ -2.39
VMA5YKL080W YJL127C-BQ3E828 52 aa0.13□□□□□ -2.39
VMA5YKL080W TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
VMA5YKL080W MEC1P38111 2368 aa0.1□□□□□ -2.39
VMA5YKL080W CUP1-1P0CX80 61 aa0.09□□□□□ -2.4
VMA5YKL080W CUP1-2P0CX81 61 aa0.09□□□□□ -2.4
VMA5YKL080W GCN1P33892 2672 aaKnown RBP0.08□□□□□ -2.4
VMA5YKL080W IRA2P19158 3079 aa0.02□□□□□ -2.41
VMA5YKL080W PMP3P87284 55 aa0.01□□□□□ -2.41
VMA5YKL080W DYN1P36022 4092 aa0.01□□□□□ -2.41
VMA5YKL080W TOM1Q03280 3268 aa0□□□□□ -2.41
VMA5YKL080W VPS13Q07878 3144 aa-0□□□□□ -2.41
VMA5YKL080W TRA1P38811 3744 aa-0.04□□□□□ -2.42
VMA5YKL080W IRA1P18963 3092 aa-0.06□□□□□ -2.42
VMA5YKL080W TEL1P38110 2787 aa-0.06□□□□□ -2.42
VMA5YKL080W CSF1Q12150 2958 aa-0.07□□□□□ -2.42
VMA5YKL080W TOM7P53507 60 aa-0.1□□□□□ -2.43
VMA5YKL080W MLP2P40457 1679 aa-0.11□□□□□ -2.43
VMA5YKL080W HOR7Q05827 59 aa-0.11□□□□□ -2.43
VMA5YKL080W YMR105W-AQ8TGS8 64 aa-0.14□□□□□ -2.43
VMA5YKL080W CHC1P22137 1653 aaKnown RBP-0.21□□□□□ -2.44
VMA5YKL080W YDR034W-BQ6Q5X2 51 aa-0.33□□□□□ -2.46
VMA5YKL080W NCE101Q02820 53 aa-0.41□□□□□ -2.48
VMA5YKL080W YLL066W-BQ8TGJ7 56 aa-0.44□□□□□ -2.48
VMA5YKL080W RPL39P04650 51 aa-0.61□□□□□ -2.51
VMA5YKL080W YIL046W-AQ3E7Z4 54 aa-0.63□□□□□ -2.51
VMA5YKL080W Q0297Q9ZZV8 51 aa-0.71□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 28.2 ms