RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YPR010C-AA5Z2X5 72 aa-0.16□□□□□ -2.44
SPC42YKL042W YGL258W-AQ3E740 77 aa-0.17□□□□□ -2.44
SPC42YKL042W NUP188P52593 1655 aaKnown RBP-0.18□□□□□ -2.44
SPC42YKL042W YOR072W-BQ3E832 53 aa-0.19□□□□□ -2.44
SPC42YKL042W COA2Q3E823 68 aa-0.21□□□□□ -2.44
SPC42YKL042W MON2P48563 1636 aaPredicted RBP-0.21□□□□□ -2.44
SPC42YKL042W SSK2P53599 1579 aa-0.23□□□□□ -2.45
SPC42YKL042W BUD3P25558 1636 aa-0.25□□□□□ -2.45
SPC42YKL042W YHR050W-AQ05451 56 aa-0.27□□□□□ -2.45
SPC42YKL042W TOR2P32600 2474 aaKnown RBP-0.28□□□□□ -2.45
SPC42YKL042W FMP27Q06179 2628 aa-0.29□□□□□ -2.46
SPC42YKL042W NUP192P47054 1683 aa-0.29□□□□□ -2.46
SPC42YKL042W ULS1Q08562 1619 aa-0.3□□□□□ -2.46
SPC42YKL042W THO2P53552 1597 aaKnown RBP-0.3□□□□□ -2.46
SPC42YKL042W FIG2P25653 1609 aa-0.31□□□□□ -2.46
SPC42YKL042W USO1P25386 1790 aa-0.31□□□□□ -2.46
SPC42YKL042W STU1P38198 1513 aa-0.31□□□□□ -2.46
SPC42YKL042W PEP1P32319 1579 aa-0.32□□□□□ -2.46
SPC42YKL042W DYN1P36022 4092 aa-0.32□□□□□ -2.46
SPC42YKL042W YOR316C-AQ3E806 69 aa-0.34□□□□□ -2.46
SPC42YKL042W YPR117WQ06116 2489 aa-0.35□□□□□ -2.46
SPC42YKL042W ATG2P53855 1592 aa-0.35□□□□□ -2.47
SPC42YKL042W MEC1P38111 2368 aa-0.35□□□□□ -2.47
SPC42YKL042W NUP170P38181 1502 aa-0.36□□□□□ -2.47
SPC42YKL042W FLO1P32768 1537 aa-0.37□□□□□ -2.47
SPC42YKL042W RKR1Q04781 1562 aa-0.38□□□□□ -2.47
SPC42YKL042W HIR3P47171 1648 aa-0.38□□□□□ -2.47
SPC42YKL042W GCN2P15442 1659 aa-0.4□□□□□ -2.47
SPC42YKL042W YDR034C-AP0C289 58 aa-0.41□□□□□ -2.48
SPC42YKL042W YJL133C-AQ3E7A3 74 aa-0.43□□□□□ -2.48
SPC42YKL042W RPL29P05747 59 aaPredicted RBP-0.44□□□□□ -2.48
SPC42YKL042W TEL1P38110 2787 aa-0.44□□□□□ -2.48
SPC42YKL042W MDN1Q12019 4910 aaKnown RBP-0.46□□□□□ -2.48
SPC42YKL042W YLR342W-AQ3E810 57 aa-0.46□□□□□ -2.48
SPC42YKL042W DDR2P89113 61 aa-0.47□□□□□ -2.48
SPC42YKL042W Q0017Q9ZZX8 53 aa-0.49□□□□□ -2.49
SPC42YKL042W COX9P07255 59 aa-0.53□□□□□ -2.49
SPC42YKL042W GCN1P33892 2672 aaKnown RBP-0.58□□□□□ -2.5
SPC42YKL042W YHR073W-AP0C5N7 58 aa-0.58□□□□□ -2.5
SPC42YKL042W YML054C-AQ3E809 52 aa-0.58□□□□□ -2.5
SPC42YKL042W YJL127C-BQ3E828 52 aa-0.65□□□□□ -2.51
SPC42YKL042W CSF1Q12150 2958 aa-0.65□□□□□ -2.51
SPC42YKL042W TRA1P38811 3744 aa-0.66□□□□□ -2.51
SPC42YKL042W SMX2P40204 77 aaKnown RBP-0.69□□□□□ -2.52
SPC42YKL042W CUP1-1P0CX80 61 aa-0.71□□□□□ -2.52
SPC42YKL042W CUP1-2P0CX81 61 aa-0.71□□□□□ -2.52
SPC42YKL042W IRA1P18963 3092 aa-0.73□□□□□ -2.53
SPC42YKL042W YMR105W-AQ8TGS8 64 aa-0.77□□□□□ -2.53
SPC42YKL042W NUM1Q00402 2748 aa-0.8□□□□□ -2.54
SPC42YKL042W TOM7P53507 60 aa-0.81□□□□□ -2.54
SPC42YKL042W MLP2P40457 1679 aa-0.82□□□□□ -2.54
SPC42YKL042W CHC1P22137 1653 aaKnown RBP-0.83□□□□□ -2.54
SPC42YKL042W PMP3P87284 55 aa-0.87□□□□□ -2.55
SPC42YKL042W IRA2P19158 3079 aa-0.89□□□□□ -2.55
SPC42YKL042W HOR7Q05827 59 aa-0.93□□□□□ -2.56
SPC42YKL042W VPS13Q07878 3144 aa-0.98□□□□□ -2.57
SPC42YKL042W YLL066W-BQ8TGJ7 56 aa-1.09□□□□□ -2.58
SPC42YKL042W NCE101Q02820 53 aa-1.19□□□□□ -2.6
SPC42YKL042W TOM1Q03280 3268 aa-1.46□□□□□ -2.64
SPC42YKL042W RPL39P04650 51 aa-1.54□□□□□ -2.66
SPC42YKL042W Q0297Q9ZZV8 51 aa-1.82□□□□□ -2.7
SPC42YKL042W YIL046W-AQ3E7Z4 54 aa-1.88□□□□□ -2.71
SPC42YKL042W YDR034W-BQ6Q5X2 51 aa-2.58□□□□□ -2.82
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms