RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W VMA9Q3E7B6 73 aa-1.45□□□□□ -2.64
SPO12YHR152W YOR192C-CQ3E736 78 aa-1.48□□□□□ -2.65
SPO12YHR152W DYN1P36022 4092 aa-1.49□□□□□ -2.65
SPO12YHR152W YOR093CQ12275 1648 aa-1.5□□□□□ -2.65
SPO12YHR152W GCN1P33892 2672 aaKnown RBP-1.57□□□□□ -2.66
SPO12YHR152W YFR010W-AP0C5N0 62 aa-1.62□□□□□ -2.67
SPO12YHR152W YBT1P32386 1661 aa-1.64□□□□□ -2.67
SPO12YHR152W FIG2P25653 1609 aa-1.66□□□□□ -2.67
SPO12YHR152W YCF1P39109 1515 aaKnown RBP-1.7□□□□□ -2.68
SPO12YHR152W YPR010C-AA5Z2X5 72 aa-1.71□□□□□ -2.68
SPO12YHR152W YKL023C-AQ2V2P3 75 aa-1.72□□□□□ -2.68
SPO12YHR152W THO2P53552 1597 aaKnown RBP-1.81□□□□□ -2.7
SPO12YHR152W CUP1-1P0CX80 61 aa-1.84□□□□□ -2.7
SPO12YHR152W CUP1-2P0CX81 61 aa-1.84□□□□□ -2.7
SPO12YHR152W Q0017Q9ZZX8 53 aa-1.85□□□□□ -2.71
SPO12YHR152W PDR5P33302 1511 aaKnown RBP-1.86□□□□□ -2.71
SPO12YHR152W YOR316C-AQ3E806 69 aa-1.91□□□□□ -2.72
SPO12YHR152W CDC25P04821 1589 aa-1.96□□□□□ -2.72
SPO12YHR152W CSF1Q12150 2958 aa-2□□□□□ -2.73
SPO12YHR152W YML054C-AQ3E809 52 aa-2.01□□□□□ -2.73
SPO12YHR152W NUP188P52593 1655 aaKnown RBP-2.02□□□□□ -2.73
SPO12YHR152W YDR034C-AP0C289 58 aa-2.04□□□□□ -2.74
SPO12YHR152W BUD3P25558 1636 aa-2.04□□□□□ -2.74
SPO12YHR152W RPL29P05747 59 aaPredicted RBP-2.07□□□□□ -2.74
SPO12YHR152W FLO1P32768 1537 aa-2.08□□□□□ -2.74
SPO12YHR152W USO1P25386 1790 aa-2.12□□□□□ -2.75
SPO12YHR152W TRA1P38811 3744 aa-2.13□□□□□ -2.75
SPO12YHR152W NUM1Q00402 2748 aa-2.17□□□□□ -2.76
SPO12YHR152W IRA1P18963 3092 aa-2.18□□□□□ -2.76
SPO12YHR152W SSK2P53599 1579 aa-2.19□□□□□ -2.76
SPO12YHR152W SPT6P23615 1451 aaKnown RBP-2.19□□□□□ -2.76
SPO12YHR152W NUP192P47054 1683 aa-2.21□□□□□ -2.76
SPO12YHR152W GCN2P15442 1659 aa-2.23□□□□□ -2.77
SPO12YHR152W ATG2P53855 1592 aa-2.24□□□□□ -2.77
SPO12YHR152W IRA2P19158 3079 aa-2.26□□□□□ -2.77
SPO12YHR152W YMR105W-AQ8TGS8 64 aa-2.26□□□□□ -2.77
SPO12YHR152W STU1P38198 1513 aa-2.29□□□□□ -2.78
SPO12YHR152W YHR073W-AP0C5N7 58 aa-2.35□□□□□ -2.79
SPO12YHR152W NUP170P38181 1502 aa-2.37□□□□□ -2.79
SPO12YHR152W YJL133C-AQ3E7A3 74 aa-2.39□□□□□ -2.79
SPO12YHR152W DDR2P89113 61 aa-2.43□□□□□ -2.8
SPO12YHR152W ULS1Q08562 1619 aa-2.43□□□□□ -2.8
SPO12YHR152W COX9P07255 59 aa-2.44□□□□□ -2.8
SPO12YHR152W HIR3P47171 1648 aa-2.45□□□□□ -2.8
SPO12YHR152W PEP1P32319 1579 aa-2.48□□□□□ -2.81
SPO12YHR152W VPS13Q07878 3144 aa-2.51□□□□□ -2.81
SPO12YHR152W MON2P48563 1636 aaPredicted RBP-2.55□□□□□ -2.82
SPO12YHR152W YLR342W-AQ3E810 57 aa-2.58□□□□□ -2.82
SPO12YHR152W RKR1Q04781 1562 aa-2.6□□□□□ -2.83
SPO12YHR152W YJL127C-BQ3E828 52 aa-2.71□□□□□ -2.84
SPO12YHR152W PMP3P87284 55 aa-2.84□□□□□ -2.86
SPO12YHR152W SMX2P40204 77 aaKnown RBP-2.89□□□□□ -2.87
SPO12YHR152W YLL066W-BQ8TGJ7 56 aa-2.9□□□□□ -2.87
SPO12YHR152W HOR7Q05827 59 aa-3.02□□□□□ -2.89
SPO12YHR152W CHC1P22137 1653 aaKnown RBP-3.17□□□□□ -2.92
SPO12YHR152W MLP2P40457 1679 aa-3.24□□□□□ -2.93
SPO12YHR152W TOM1Q03280 3268 aa-3.24□□□□□ -2.93
SPO12YHR152W TOM7P53507 60 aa-3.28□□□□□ -2.93
SPO12YHR152W NCE101Q02820 53 aa-3.59□□□□□ -2.98
SPO12YHR152W RPL39P04650 51 aa-3.94□□□□□ -3.04
SPO12YHR152W Q0297Q9ZZV8 51 aa-4.13□□□□□ -3.07
SPO12YHR152W YIL046W-AQ3E7Z4 54 aa-4.4□□□□□ -3.11
SPO12YHR152W YDR034W-BQ6Q5X2 51 aa-5.38□□□□□ -3.27
Retrieved 63 of 5,963 RNA–protein pairs in 34.8 ms