RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W RPO31P04051 1460 aa-0.54□□□□□ -2.5
VMA21YGR105W YOR093CQ12275 1648 aa-0.55□□□□□ -2.5
VMA21YGR105W YOL131WQ08270 108 aa-0.55□□□□□ -2.5
VMA21YGR105W Q0017Q9ZZX8 53 aa-0.55□□□□□ -2.5
VMA21YGR105W THO2P53552 1597 aaKnown RBP-0.55□□□□□ -2.5
VMA21YGR105W YSY6P38374 65 aa-0.56□□□□□ -2.5
VMA21YGR105W YFL041W-AQ3E817 63 aa-0.56□□□□□ -2.5
VMA21YGR105W YHR213W-AQ8TGT4 77 aa-0.56□□□□□ -2.5
VMA21YGR105W YOL166W-AQ8TGJ1 51 aa-0.58□□□□□ -2.5
VMA21YGR105W NUP159P40477 1460 aa-0.59□□□□□ -2.5
VMA21YGR105W YML054C-AQ3E809 52 aa-0.59□□□□□ -2.5
VMA21YGR105W TCB3Q03640 1545 aaKnown RBP-0.59□□□□□ -2.5
VMA21YGR105W SCC2Q04002 1493 aa-0.6□□□□□ -2.5
VMA21YGR105W PAI3P01094 68 aa-0.6□□□□□ -2.51
VMA21YGR105W SKI3P17883 1432 aaKnown RBP-0.61□□□□□ -2.51
VMA21YGR105W YIL102C-AQ2V2P5 75 aa-0.61□□□□□ -2.51
VMA21YGR105W PDR5P33302 1511 aaKnown RBP-0.61□□□□□ -2.51
VMA21YGR105W YDR034C-AP0C289 58 aa-0.62□□□□□ -2.51
VMA21YGR105W YOR316C-AQ3E806 69 aa-0.62□□□□□ -2.51
VMA21YGR105W NUP188P52593 1655 aaKnown RBP-0.62□□□□□ -2.51
VMA21YGR105W MYO4P32492 1471 aa-0.63□□□□□ -2.51
VMA21YGR105W YBT1P32386 1661 aa-0.63□□□□□ -2.51
VMA21YGR105W RPL29P05747 59 aaPredicted RBP-0.64□□□□□ -2.51
VMA21YGR105W FLO1P32768 1537 aa-0.64□□□□□ -2.51
VMA21YGR105W YPR010C-AA5Z2X5 72 aa-0.66□□□□□ -2.52
VMA21YGR105W YCF1P39109 1515 aaKnown RBP-0.66□□□□□ -2.52
VMA21YGR105W YMR105W-AQ8TGS8 64 aa-0.68□□□□□ -2.52
VMA21YGR105W SSK2P53599 1579 aa-0.69□□□□□ -2.52
VMA21YGR105W GCN2P15442 1659 aa-0.69□□□□□ -2.52
VMA21YGR105W BUD3P25558 1636 aa-0.7□□□□□ -2.52
VMA21YGR105W VMA9Q3E7B6 73 aa-0.71□□□□□ -2.52
VMA21YGR105W ATG2P53855 1592 aa-0.71□□□□□ -2.52
VMA21YGR105W STU1P38198 1513 aa-0.72□□□□□ -2.52
VMA21YGR105W COX9P07255 59 aa-0.72□□□□□ -2.52
VMA21YGR105W YKL023C-AQ2V2P3 75 aa-0.72□□□□□ -2.52
VMA21YGR105W USO1P25386 1790 aa-0.74□□□□□ -2.53
VMA21YGR105W YJL133C-AQ3E7A3 74 aa-0.74□□□□□ -2.53
VMA21YGR105W YHR073W-AP0C5N7 58 aa-0.75□□□□□ -2.53
VMA21YGR105W DDR2P89113 61 aa-0.75□□□□□ -2.53
VMA21YGR105W CDC25P04821 1589 aa-0.75□□□□□ -2.53
VMA21YGR105W ULS1Q08562 1619 aa-0.76□□□□□ -2.53
VMA21YGR105W NUP192P47054 1683 aa-0.76□□□□□ -2.53
VMA21YGR105W NUP170P38181 1502 aa-0.77□□□□□ -2.53
VMA21YGR105W HIR3P47171 1648 aa-0.78□□□□□ -2.53
VMA21YGR105W PEP1P32319 1579 aa-0.79□□□□□ -2.54
VMA21YGR105W YLR342W-AQ3E810 57 aa-0.81□□□□□ -2.54
VMA21YGR105W YFR010W-AP0C5N0 62 aa-0.82□□□□□ -2.54
VMA21YGR105W RKR1Q04781 1562 aa-0.83□□□□□ -2.54
VMA21YGR105W YLL066W-BQ8TGJ7 56 aa-0.85□□□□□ -2.55
VMA21YGR105W YJL127C-BQ3E828 52 aa-0.86□□□□□ -2.55
VMA21YGR105W SPT6P23615 1451 aaKnown RBP-0.86□□□□□ -2.55
VMA21YGR105W PMP3P87284 55 aa-0.88□□□□□ -2.55
VMA21YGR105W SMX2P40204 77 aaKnown RBP-0.89□□□□□ -2.55
VMA21YGR105W MON2P48563 1636 aaPredicted RBP-0.93□□□□□ -2.56
VMA21YGR105W HOR7Q05827 59 aa-0.96□□□□□ -2.56
VMA21YGR105W CHC1P22137 1653 aaKnown RBP-0.97□□□□□ -2.56
VMA21YGR105W Q0297Q9ZZV8 51 aa-0.98□□□□□ -2.57
VMA21YGR105W MLP2P40457 1679 aa-0.99□□□□□ -2.57
VMA21YGR105W TOM7P53507 60 aa-0.99□□□□□ -2.57
VMA21YGR105W YIL046W-AQ3E7Z4 54 aa-1.04□□□□□ -2.58
VMA21YGR105W YDR034W-BQ6Q5X2 51 aa-1.05□□□□□ -2.58
VMA21YGR105W NCE101Q02820 53 aa-1.14□□□□□ -2.59
VMA21YGR105W RPL39P04650 51 aa-1.15□□□□□ -2.59
Retrieved 63 of 5,963 RNA–protein pairs in 4.9 ms