RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W FIG2P25653 1609 aa-2.01□□□□□ -2.73
LSM4YER112W TCB3Q03640 1545 aaKnown RBP-2.02□□□□□ -2.73
LSM4YER112W YOR093CQ12275 1648 aa-2.07□□□□□ -2.74
LSM4YER112W MYO4P32492 1471 aa-2.08□□□□□ -2.74
LSM4YER112W THO2P53552 1597 aaKnown RBP-2.19□□□□□ -2.76
LSM4YER112W YOR192C-CQ3E736 78 aa-2.25□□□□□ -2.77
LSM4YER112W Q0017Q9ZZX8 53 aa-2.29□□□□□ -2.78
LSM4YER112W PDR5P33302 1511 aaKnown RBP-2.37□□□□□ -2.79
LSM4YER112W YBT1P32386 1661 aa-2.4□□□□□ -2.79
LSM4YER112W YOR316C-AQ3E806 69 aa-2.4□□□□□ -2.79
LSM4YER112W CUP1-1P0CX80 61 aa-2.41□□□□□ -2.8
LSM4YER112W CUP1-2P0CX81 61 aa-2.41□□□□□ -2.8
LSM4YER112W YCF1P39109 1515 aaKnown RBP-2.42□□□□□ -2.8
LSM4YER112W YPR010C-AA5Z2X5 72 aa-2.42□□□□□ -2.8
LSM4YER112W VMA9Q3E7B6 73 aa-2.44□□□□□ -2.8
LSM4YER112W CSF1Q12150 2958 aa-2.46□□□□□ -2.8
LSM4YER112W YDR034C-AP0C289 58 aa-2.48□□□□□ -2.81
LSM4YER112W YML054C-AQ3E809 52 aa-2.5□□□□□ -2.81
LSM4YER112W NUP188P52593 1655 aaKnown RBP-2.51□□□□□ -2.81
LSM4YER112W FLO1P32768 1537 aa-2.52□□□□□ -2.81
LSM4YER112W RPL29P05747 59 aaPredicted RBP-2.54□□□□□ -2.82
LSM4YER112W YKL023C-AQ2V2P3 75 aa-2.55□□□□□ -2.82
LSM4YER112W TRA1P38811 3744 aa-2.65□□□□□ -2.83
LSM4YER112W BUD3P25558 1636 aa-2.65□□□□□ -2.83
LSM4YER112W IRA1P18963 3092 aa-2.73□□□□□ -2.85
LSM4YER112W YFR010W-AP0C5N0 62 aa-2.74□□□□□ -2.85
LSM4YER112W SSK2P53599 1579 aa-2.74□□□□□ -2.85
LSM4YER112W GCN2P15442 1659 aa-2.77□□□□□ -2.85
LSM4YER112W NUM1Q00402 2748 aa-2.8□□□□□ -2.86
LSM4YER112W ATG2P53855 1592 aa-2.8□□□□□ -2.86
LSM4YER112W CDC25P04821 1589 aa-2.83□□□□□ -2.86
LSM4YER112W STU1P38198 1513 aa-2.86□□□□□ -2.87
LSM4YER112W IRA2P19158 3079 aa-2.87□□□□□ -2.87
LSM4YER112W USO1P25386 1790 aa-2.87□□□□□ -2.87
LSM4YER112W NUP192P47054 1683 aa-2.91□□□□□ -2.87
LSM4YER112W COX9P07255 59 aa-2.93□□□□□ -2.88
LSM4YER112W DDR2P89113 61 aa-2.95□□□□□ -2.88
LSM4YER112W NUP170P38181 1502 aa-2.96□□□□□ -2.88
LSM4YER112W YMR105W-AQ8TGS8 64 aa-2.97□□□□□ -2.88
LSM4YER112W YJL133C-AQ3E7A3 74 aa-2.98□□□□□ -2.89
LSM4YER112W YHR073W-AP0C5N7 58 aa-3.06□□□□□ -2.9
LSM4YER112W HIR3P47171 1648 aa-3.07□□□□□ -2.9
LSM4YER112W PEP1P32319 1579 aa-3.08□□□□□ -2.9
LSM4YER112W SPT6P23615 1451 aaKnown RBP-3.09□□□□□ -2.9
LSM4YER112W YLR342W-AQ3E810 57 aa-3.16□□□□□ -2.92
LSM4YER112W VPS13Q07878 3144 aa-3.17□□□□□ -2.92
LSM4YER112W ULS1Q08562 1619 aa-3.2□□□□□ -2.92
LSM4YER112W RKR1Q04781 1562 aa-3.24□□□□□ -2.93
LSM4YER112W MON2P48563 1636 aaPredicted RBP-3.47□□□□□ -2.96
LSM4YER112W YJL127C-BQ3E828 52 aa-3.49□□□□□ -2.97
LSM4YER112W SMX2P40204 77 aaKnown RBP-3.64□□□□□ -2.99
LSM4YER112W PMP3P87284 55 aa-3.68□□□□□ -3
LSM4YER112W YLL066W-BQ8TGJ7 56 aa-3.81□□□□□ -3.02
LSM4YER112W HOR7Q05827 59 aa-3.94□□□□□ -3.04
LSM4YER112W CHC1P22137 1653 aaKnown RBP-4.1□□□□□ -3.07
LSM4YER112W MLP2P40457 1679 aa-4.26□□□□□ -3.09
LSM4YER112W TOM7P53507 60 aa-4.29□□□□□ -3.1
LSM4YER112W TOM1Q03280 3268 aa-4.34□□□□□ -3.1
LSM4YER112W NCE101Q02820 53 aa-4.69□□□□□ -3.16
LSM4YER112W RPL39P04650 51 aa-5.22□□□□□ -3.25
LSM4YER112W Q0297Q9ZZV8 51 aa-5.53□□□□□ -3.29
LSM4YER112W YIL046W-AQ3E7Z4 54 aa-5.86□□□□□ -3.35
LSM4YER112W YDR034W-BQ6Q5X2 51 aa-7.29□□□□□ -3.58
Retrieved 63 of 5,963 RNA–protein pairs in 5.7 ms