RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C FMP27Q06179 2628 aa-0.54□□□□□ -2.5
TCA17YEL048C YOR093CQ12275 1648 aa-0.56□□□□□ -2.5
TCA17YEL048C PDR5P33302 1511 aaKnown RBP-0.57□□□□□ -2.5
TCA17YEL048C TOR2P32600 2474 aaKnown RBP-0.58□□□□□ -2.5
TCA17YEL048C YOR316C-AQ3E806 69 aa-0.6□□□□□ -2.51
TCA17YEL048C YPR117WQ06116 2489 aa-0.61□□□□□ -2.51
TCA17YEL048C MEC1P38111 2368 aa-0.62□□□□□ -2.51
TCA17YEL048C FIG2P25653 1609 aa-0.66□□□□□ -2.51
TCA17YEL048C YBT1P32386 1661 aa-0.69□□□□□ -2.52
TCA17YEL048C Q0017Q9ZZX8 53 aa-0.7□□□□□ -2.52
TCA17YEL048C YDR034C-AP0C289 58 aa-0.71□□□□□ -2.52
TCA17YEL048C CDC25P04821 1589 aa-0.72□□□□□ -2.52
TCA17YEL048C THO2P53552 1597 aaKnown RBP-0.73□□□□□ -2.53
TCA17YEL048C SPT6P23615 1451 aaKnown RBP-0.75□□□□□ -2.53
TCA17YEL048C SSK2P53599 1579 aa-0.75□□□□□ -2.53
TCA17YEL048C RPL29P05747 59 aaPredicted RBP-0.77□□□□□ -2.53
TCA17YEL048C YML054C-AQ3E809 52 aa-0.77□□□□□ -2.53
TCA17YEL048C COX9P07255 59 aa-0.78□□□□□ -2.53
TCA17YEL048C FLO1P32768 1537 aa-0.81□□□□□ -2.54
TCA17YEL048C BUD3P25558 1636 aa-0.82□□□□□ -2.54
TCA17YEL048C NUP170P38181 1502 aa-0.85□□□□□ -2.55
TCA17YEL048C STU1P38198 1513 aa-0.85□□□□□ -2.55
TCA17YEL048C DDR2P89113 61 aa-0.86□□□□□ -2.55
TCA17YEL048C TEL1P38110 2787 aa-0.87□□□□□ -2.55
TCA17YEL048C ATG2P53855 1592 aa-0.89□□□□□ -2.55
TCA17YEL048C NUP188P52593 1655 aaKnown RBP-0.9□□□□□ -2.55
TCA17YEL048C YJL133C-AQ3E7A3 74 aa-0.9□□□□□ -2.55
TCA17YEL048C NUP192P47054 1683 aa-0.92□□□□□ -2.56
TCA17YEL048C PEP1P32319 1579 aa-0.94□□□□□ -2.56
TCA17YEL048C YLR342W-AQ3E810 57 aa-0.94□□□□□ -2.56
TCA17YEL048C DYN1P36022 4092 aa-0.94□□□□□ -2.56
TCA17YEL048C RKR1Q04781 1562 aa-1.01□□□□□ -2.57
TCA17YEL048C MON2P48563 1636 aaPredicted RBP-1.01□□□□□ -2.57
TCA17YEL048C ULS1Q08562 1619 aa-1.01□□□□□ -2.57
TCA17YEL048C USO1P25386 1790 aa-1.03□□□□□ -2.57
TCA17YEL048C YHR073W-AP0C5N7 58 aa-1.04□□□□□ -2.58
TCA17YEL048C GCN2P15442 1659 aa-1.04□□□□□ -2.58
TCA17YEL048C HIR3P47171 1648 aa-1.1□□□□□ -2.59
TCA17YEL048C CUP1-1P0CX80 61 aa-1.12□□□□□ -2.59
TCA17YEL048C CUP1-2P0CX81 61 aa-1.12□□□□□ -2.59
TCA17YEL048C SMX2P40204 77 aaKnown RBP-1.17□□□□□ -2.6
TCA17YEL048C MDN1Q12019 4910 aaKnown RBP-1.18□□□□□ -2.6
TCA17YEL048C GCN1P33892 2672 aaKnown RBP-1.18□□□□□ -2.6
TCA17YEL048C YJL127C-BQ3E828 52 aa-1.19□□□□□ -2.6
TCA17YEL048C YMR105W-AQ8TGS8 64 aa-1.24□□□□□ -2.61
TCA17YEL048C CSF1Q12150 2958 aa-1.24□□□□□ -2.61
TCA17YEL048C PMP3P87284 55 aa-1.37□□□□□ -2.63
TCA17YEL048C TRA1P38811 3744 aa-1.43□□□□□ -2.64
TCA17YEL048C IRA1P18963 3092 aa-1.46□□□□□ -2.64
TCA17YEL048C NUM1Q00402 2748 aa-1.57□□□□□ -2.66
TCA17YEL048C HOR7Q05827 59 aa-1.57□□□□□ -2.66
TCA17YEL048C IRA2P19158 3079 aa-1.64□□□□□ -2.67
TCA17YEL048C TOM7P53507 60 aa-1.67□□□□□ -2.68
TCA17YEL048C CHC1P22137 1653 aaKnown RBP-1.75□□□□□ -2.69
TCA17YEL048C YLL066W-BQ8TGJ7 56 aa-1.86□□□□□ -2.71
TCA17YEL048C VPS13Q07878 3144 aa-1.86□□□□□ -2.71
TCA17YEL048C MLP2P40457 1679 aa-1.9□□□□□ -2.71
TCA17YEL048C NCE101Q02820 53 aa-2.13□□□□□ -2.75
TCA17YEL048C TOM1Q03280 3268 aa-2.57□□□□□ -2.82
TCA17YEL048C RPL39P04650 51 aa-2.76□□□□□ -2.85
TCA17YEL048C Q0297Q9ZZV8 51 aa-3.39□□□□□ -2.95
TCA17YEL048C YIL046W-AQ3E7Z4 54 aa-3.43□□□□□ -2.96
TCA17YEL048C YDR034W-BQ6Q5X2 51 aa-4.7□□□□□ -3.16
Retrieved 63 of 5,963 RNA–protein pairs in 6.7 ms