RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ADCY1Q08828 1119 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 BYSLQ13895 437 aaKnown RBP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 GPNMBQ14956 572 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 SLMAPQ14BN4 828 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 DPYSL2Q16555 572 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 ARL13BQ3SXY8 428 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 TRIM60Q495X7 471 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 ACBD5Q5T8D3 534 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 PM20D1Q6GTS8 502 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 PCGF5Q86SE9 256 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 GPR65Q8IYL9 337 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 SPPL2BQ8TCT7 592 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 HDAC7Q8WUI4 952 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 NT5C3BQ969T7 300 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 NTAN1Q96AB6 310 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 C8orf48Q96LL4 319 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC114Q96M63 670 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 SMOQ99835 787 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 RTP3Q9BQQ7 232 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 PAAF1Q9BRP4 392 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 TMEM106CQ9BVX2 250 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 FBXO44Q9H4M3 255 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 NRDE2Q9H7Z3 1164 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 ZWILCHQ9H900 591 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 FAM53CQ9NYF3 392 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 NFU1Q9UMS0 254 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 C3orf70A6NLC5 250 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 TULP2O00295 520 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 CLDN5O00501 218 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 NRP1O14786 923 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 KIAA0355O15063 1070 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 LIASO43766 372 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 OPA1O60313 960 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 SEC31AO94979 1220 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 LTFP02788 710 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 HSPA8P11142 646 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ATF2P15336 505 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 IBSPP21815 317 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 FGFR3P22607 806 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 IL1R2P27930 398 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 STIP1P31948 543 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 HSPA9P38646 679 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ARL4AP40617 200 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ALDH7A1P49419 539 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PSEN1P49768 467 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 SULT1E1P49888 294 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ARSEP51690 589 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 HDAC4P56524 1084 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 FAM193AP78312 1265 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 KRT17Q04695 432 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 MRPL58Q14197 206 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 KIAA0319Q5VV43 1072 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 AADACL2Q6P093 401 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 SCYL2Q6P3W7 929 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 FUT10Q6P4F1 479 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 LRIG3Q6UXM1 1119 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PDZD4Q76G19 769 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 BNIPLQ7Z465 357 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ADAT2Q7Z6V5 191 aaKnown RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF280BQ86YH2 543 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 CPNE8Q86YQ8 564 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 RFX6Q8HWS3 928 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 TMEM199Q8N511 208 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ARFGAP1Q8N6T3 406 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 RAPGEF5Q92565 580 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 HSPH1Q92598 858 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 FAF2Q96CS3 445 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 SNF8Q96H20 258 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 CFAP57Q96MR6 1250 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 RNF157Q96PX1 679 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 NPY6RQ99463 290 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ULBP1Q9BZM6 244 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PHACTR1Q9C0D0 580 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PCDH9Q9HC56 1237 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 DONSONQ9NYP3 566 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 HSFX1Q9UBD0 423 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 ASIC3Q9UHC3 531 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PCSK1NQ9UHG2 260 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 MAFFQ9ULX9 164 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PCDHB5Q9Y5E4 795 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 TIMM13Q9Y5L4 95 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-215ENST00000641371 RAD54BQ9Y620 910 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 USP3Q9Y6I4 520 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
PHGDH-215ENST00000641371 PCNTO95613 3336 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 TET1Q8NFU7 2136 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 SCN5AQ14524 2016 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-215ENST00000641371 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 TBKBP1A7MCY6 615 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 HHLA1C9JL84 531 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 H3BRJ5 948 aa10.13□□□□□ -0.79
PHGDH-215ENST00000641371 APOL1O14791 398 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms