RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 BCL7CQ8WUZ0 217 aaPredicted RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 INTS12Q96CB8 462 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 NAP1L4Q99733 375 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 NUP85Q9BW27 656 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 OSBPL6Q9BZF3 934 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 MTMR12Q9C0I1 747 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 MOV10Q9HCE1 1003 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 AGO4Q9HCK5 861 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 RNF146Q9NTX7 359 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 TRNAU1APQ9NX07 287 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 PLK2Q9NYY3 685 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 FAM153AQ9UHL3 310 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 AJAP1Q9UKB5 411 aaPredicted RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 ANGPTL2Q9UKU9 493 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 SNX12Q9UMY4 172 aa8.28□□□□□ -1.08
RTTN-223ENST00000640931 APOBEC2Q9Y235 224 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 RBBP6Q7Z6E9 1792 aaKnown RBP8.28□□□□□ -1.08
RTTN-223ENST00000640931 TRAFD1O14545 582 aaPredicted RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 SLC22A1O15245 554 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 SULT1B1O43704 296 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 EXTL3O43909 919 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 RNGTTO60942 597 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 GPC4O75487 556 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 OR5F1O95221 314 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 SHBGP04278 402 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 GZMAP12544 262 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 VCLP18206 1134 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 HSD17B3P37058 310 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 PAFAH1B1P43034 410 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 NR2C2P49116 596 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 CARSP49589 748 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 DNM2P50570 870 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 NPEPPSP55786 919 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 EIF3BP55884 814 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 ATP6V0D1P61421 351 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 OLR1P78380 273 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 TAGLNQ01995 201 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 DSG1Q02413 1049 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 ACVR2BQ13705 512 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 VGLL4Q14135 290 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 SPDYAQ5MJ70 313 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 METTL11BQ5VVY1 283 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 RWDD4Q6NW29 188 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 B3GNT9Q6UX72 402 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 RNF207Q6ZRF8 634 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 METTL3Q86U44 580 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 DAW1Q8N136 415 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 TTC8Q8TAM2 541 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 CHPT1Q8WUD6 406 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 BORCS5Q969J3 196 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 FAM84AQ96KN4 292 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 FIZ1Q96SL8 496 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 RMDN3Q96TC7 470 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 LSM14BQ9BX40 385 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 TEKT3Q9BXF9 490 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 TRIM55Q9BYV6 548 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 RBM38Q9H0Z9 239 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 TLE6Q9H808 572 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 MARCH7Q9H992 704 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 SEPT11Q9NVA2 429 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 RNF14Q9UBS8 474 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 ZC3H7BQ9UGR2 993 aaKnown RBP8.27□□□□□ -1.09
RTTN-223ENST00000640931 FBXL5Q9UKA1 691 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 PNMA3Q9UL41 463 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 CAPN11Q9UMQ6 739 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 ZMYM2Q9UBW7 1377 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 ASTN1O14525 1302 aa8.27□□□□□ -1.09
RTTN-223ENST00000640931 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.26□□□□□ -1.09
RTTN-223ENST00000640931 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 ADCY6O43306 1168 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 LRRN2O75325 713 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 RSL1D1O76021 490 aaKnown RBP8.26□□□□□ -1.09
RTTN-223ENST00000640931 RGS20O76081 388 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 NOL4O94818 638 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 TOMM70O94826 608 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 ALX3O95076 343 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 FUCA1P04066 466 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 P4HA1P13674 534 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 CHN1P15882 459 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 MARK3P27448 753 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 CTNNA1P35221 906 aaKnown RBP8.26□□□□□ -1.09
RTTN-223ENST00000640931 RCVRNP35243 200 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 GRIA2P42262 883 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 MMP13P45452 471 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 PHKA2P46019 1235 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 P2RX3P56373 397 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 CNTN2Q02246 1040 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 C19orf57Q0VDD7 668 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 SMARCB1Q12824 385 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 PDAP1Q13442 181 aaKnown RBP8.26□□□□□ -1.09
RTTN-223ENST00000640931 SQLEQ14534 574 aa8.26□□□□□ -1.09
RTTN-223ENST00000640931 SF3B4Q15427 424 aaKnown RBP eCLIP8.26□□□□□ -1.09
RTTN-223ENST00000640931 CCDC58Q4VC31 144 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms