RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ACO1P21399 889 aaKnown RBP8.45□□□□□ -1.06
SCARB2-220ENST00000640076 TAF6P49848 677 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 RENBPP51606 427 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 CLCNKBP51801 687 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 EPHB4P54760 987 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 LILRA4P59901 499 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 DEFB103AP81534 67 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 CDK17Q00537 523 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 GTF2H3Q13889 308 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 ASIC2Q16515 512 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 UPP1Q16831 310 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 SV2CQ496J9 727 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 GPR158Q5T848 1215 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 LVRNQ6Q4G3 990 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 SCARA5Q6ZMJ2 495 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF365Q70YC5 407 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 OTOP2Q7RTS6 562 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 IRF2BP2Q7Z5L9 587 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 CHCHD4Q8N4Q1 142 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 USP7Q93009 1102 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 TOP1MTQ969P6 601 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF560Q96MR9 790 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 CHP1Q99653 195 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 MENTQ9BUN1 341 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 ZMYND8Q9ULU4 1186 aaPredicted RBP8.45□□□□□ -1.06
SCARB2-220ENST00000640076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
SCARB2-220ENST00000640076 RANBP2P49792 3224 aaKnown RBP8.45□□□□□ -1.06
SCARB2-220ENST00000640076 COL4A6Q14031 1691 aa8.45□□□□□ -1.06
SCARB2-220ENST00000640076 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TRAV20A0A0B4J274 112 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 A0A1W2PQU0 124 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 KPNA7A9QM74 516 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 AGRPO00253 132 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 DGKIO75912 1065 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 UPP2O95045 317 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 WEE2P0C1S8 567 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SKILP12757 684 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 FERP16591 822 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 BPIP17213 487 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 IGFBP6P24592 240 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 USP8P40818 1118 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PRKCIP41743 596 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PSMC1P62191 440 aaKnown RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TNNC1P63316 161 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 RNASELQ05823 741 aaKnown RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TRIM61Q5EBN2 209 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 KIAA1211LQ6NV74 962 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CYP26C1Q6V0L0 522 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TMTC1Q8IUR5 882 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 COLGALT2Q8IYK4 626 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 RABGGTAQ92696 567 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 DPF3Q92784 378 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 UROC1Q96N76 676 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CNTNAP3BQ96NU0 1288 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CNTNAP3Q9BZ76 1288 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SMYD3Q9H7B4 428 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CYP3A43Q9HB55 503 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CISHQ9NSE2 258 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 GDAP2Q9NXN4 497 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 ARHGAP20Q9P2F6 1191 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CNTN6Q9UQ52 1028 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SNX9Q9Y5X1 595 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 DGKBQ9Y6T7 804 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TBKBP1A7MCY6 615 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 MEN1O00255 615 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CYP26A1O43174 497 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 B3GAT3O94766 335 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 FGBP02675 491 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SERPING1P05155 500 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PLEKP08567 350 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 KRT5P13647 590 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PEX19P40855 299 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 RAP1GAPP47736 663 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CDH8P55286 799 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 KLHL30Q0D2K2 578 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TOMM20Q15388 145 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 ARHGAP29Q52LW3 1261 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PSRC1Q6PGN9 363 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 UNC5AQ6ZN44 842 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 LIMS2Q7Z4I7 341 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CBARPQ8N350 705 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 MMS19Q96T76 1030 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 MRPL9Q9BYD2 267 aaKnown RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SLC13A1Q9BZW2 595 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 FAM124BQ9H5Z6 455 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 ANLNQ9NQW6 1124 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 DNAJB4Q9UDY4 337 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PCDHB10Q9UN67 800 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 DMTF1Q9Y222 760 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 PCDHB4Q9Y5E5 795 aa8.44□□□□□ -1.06
SCARB2-220ENST00000640076 BZW2Q9Y6E2 419 aaKnown RBP8.44□□□□□ -1.06
SCARB2-220ENST00000640076 ARHGAP6O43182 974 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms