RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ITGA9Q13797 1035 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 INPP5AQ14642 412 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 SLC15A2Q16348 729 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 IMPG1Q17R60 797 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 SLC45A4Q5BKX6 768 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.35
SCARB2-210ENST00000638567 GRAMD4Q6IC98 578 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 NOTUMQ6P988 496 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 EGFL8Q99944 293 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
SCARB2-210ENST00000638567 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
SCARB2-210ENST00000638567 TPST1O60507 370 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 GRK2P25098 689 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 GRIK1P39086 918 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 DPYSL3Q14195 570 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 SWT1Q5T5J6 900 aaKnown RBP17.21■□□□□ 0.35
SCARB2-210ENST00000638567 TDRD10Q5VZ19 366 aaKnown RBP17.21■□□□□ 0.35
SCARB2-210ENST00000638567 VSIG10LQ86VR7 867 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 NSMCE4AQ9NXX6 385 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 HACD3Q9P035 362 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 LRCH1Q9Y2L9 728 aa17.21■□□□□ 0.35
SCARB2-210ENST00000638567 KDELR1P24390 212 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 HADHAP40939 763 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 ZACNQ401N2 412 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 PCYOX1LQ8NBM8 494 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 UBIAD1Q9Y5Z9 338 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 THRAP10827 490 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 DEFB107AQ8IZN7 70 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 COLGALT1Q8NBJ5 622 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 THAP11Q96EK4 314 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 TSPAN17Q96FV3 270 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 SAR1AQ9NR31 198 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 ENTPD5O75356 428 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 RBL1P28749 1068 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 TM4SF1P30408 202 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 NOMO3P69849 1222 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CDK16Q00536 496 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CAPRIN1Q14444 709 aaKnown RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 C6orf10Q5SRN2 563 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 ANGPTL8Q6UXH0 198 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 INPP5DQ92835 1189 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CNBD2Q96M20 576 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CCT7Q99832 543 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 A1CFQ9NQ94 594 aaKnown RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 R3HDM2Q9Y2K5 976 aaKnown RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 OCA2Q04671 838 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 PDK4Q16654 411 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 UGCGQ16739 394 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 ANKRD27Q96NW4 1050 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
SCARB2-210ENST00000638567 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
SCARB2-210ENST00000638567 TIMM44O43615 452 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 DSG3P32926 999 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 RPL22P35268 128 aaKnown RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 NCALDP61601 193 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 IL31Q6EBC2 164 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 TTC27Q6P3X3 843 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 TAS2R42Q7RTR8 314 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SCUBE3Q8IX30 993 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 FAM53CQ9NYF3 392 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 STX18Q9P2W9 335 aaKnown RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 BARX2Q9UMQ3 279 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SRP72O76094 671 aaKnown RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 MICAL2O94851 1124 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SERPINB8P50452 374 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 MGAT5Q09328 741 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 PDAP1Q13442 181 aaKnown RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 DENND1BQ6P3S1 775 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 CAAP1Q9H8G2 361 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 IARS2Q9NSE4 1012 aaKnown RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SYNPO2Q9UMS6 1093 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SOX13Q9UN79 622 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 LTN1O94822 1766 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 MEI4A8MW99 385 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 FKBP6O75344 327 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SUPT3HO75486 399 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 ALADP13716 330 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 CNTFP26441 200 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 BCAT1P54687 386 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 SPATA2LQ8IUW3 424 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-210ENST00000638567 ALLCQ8N6M5 410 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 CHST12Q9NRB3 414 aa17.19■□□□□ 0.34
SCARB2-210ENST00000638567 FOXO6A8MYZ6 492 aa17.18■□□□□ 0.34
SCARB2-210ENST00000638567 M0R2N6 131 aa17.18■□□□□ 0.34
SCARB2-210ENST00000638567 DNM1LO00429 736 aa17.18■□□□□ 0.34
SCARB2-210ENST00000638567 HNRNPCP07910 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms