RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 PSMG1O95456 288 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 SLC34A1Q06495 639 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 CTAGE3PQ8IX95 158 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 PPM1NQ8N819 430 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 STMN2Q93045 179 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 TMEM176AQ96HP8 235 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 PLLPQ9Y342 182 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 FAM237BA0A1B0GVD1 139 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 EIF4E1BA6NMX2 242 aaKnown RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 A8MXQ7 604 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 M0QYV0 167 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 CILPO75339 1184 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 AVILO75366 819 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 KRT36O76013 467 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 HMGCRP04035 888 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 GPD1P21695 349 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 PRKCHP24723 683 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 GPD2P43304 727 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 SESN3P58005 492 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 OSTNP61366 133 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZRSR2Q15696 482 aaKnown RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ATG16L1Q676U5 607 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 METTL7BQ6UX53 244 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 CDHR3Q6ZTQ4 885 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 CYP4V2Q6ZWL3 525 aaPredicted RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 TTC7BQ86TV6 843 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 FAM136AQ96C01 138 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 RNF157Q96PX1 679 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 TWNKQ96RR1 684 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 NMUR2Q9GZQ4 415 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 STX18Q9P2W9 335 aaKnown RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZC3H7BQ9UGR2 993 aaKnown RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 LRCH1Q9Y2L9 728 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 IGKV6-21A0A0C4DH24 114 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 PDHA1P08559 390 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 CCNFP41002 786 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ORC1Q13415 861 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 IRGCQ6NXR0 463 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 MAP7D3Q8IWC1 876 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 SPDYE1Q8NFV5 336 aaPredicted RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ELOVL4Q9GZR5 314 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 SMYD3Q9H7B4 428 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 RPF1Q9H9Y2 349 aaKnown RBP20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 POPDC2Q9HBU9 364 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 AFG3L2Q9Y4W6 797 aa20.92■□□□□ 0.94
SYNGAP1-227ENST00000638142 ANK1P16157 1881 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 CAPN9O14815 690 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 GSTA2P09210 222 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 TGFB3P10600 412 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 EDNRBP24530 442 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 MAGEA6P43360 314 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 CDK18Q07002 472 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 LRRC71Q8N4P6 559 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 CEP120Q8N960 986 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 C1orf127Q8N9H9 656 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 SYT15Q9BQS2 421 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 KLC2Q9H0B6 622 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 FZD8Q9H461 694 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 HMGXB4Q9UGU5 601 aa20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 TNS1Q9HBL0 1735 aaKnown RBP20.91■□□□□ 0.94
SYNGAP1-227ENST00000638142 C2orf71A6NGG8 1288 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 C2CD4BA6NLJ0 364 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 E5RJQ4 531 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 PRPSAP2O60256 369 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 CXCL8P10145 99 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 SKIP12755 728 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 OSBPP22059 807 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 RAP1GDS1P52306 607 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 MXRA7P84157 204 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 SYCP2LQ5T4T6 812 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 LRRC74BQ6ZQY2 392 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 LRRC39Q96DD0 335 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 CYP3A43Q9HB55 503 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 SIRPGQ9P1W8 387 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 KCNN4O15554 427 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 MAGEC1O60732 1142 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 VDRP11473 427 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 TGM2P21980 687 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 PGM1P36871 562 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 PDK2Q15119 407 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 C1orf228Q6PIY5 440 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 TMPRSS6Q8IU80 811 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 MICALL2Q8IY33 904 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 PLD5Q8N7P1 536 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 RAB3IL1Q8TBN0 382 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 CCDC110Q8TBZ0 833 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 WDR60Q8WVS4 1066 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 E2F7Q96AV8 911 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 MTBPQ96DY7 904 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 MIS12Q9H081 205 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 ARHGEF4Q9NR80 690 aa20.9■□□□□ 0.94
SYNGAP1-227ENST00000638142 CAPN14A8MX76 684 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 PDGFRAP16234 1089 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 TUBP50607 506 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 TMPRSS15P98073 1019 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 BST1Q10588 318 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 KRT81Q14533 505 aa20.89■□□□□ 0.94
SYNGAP1-227ENST00000638142 TMEM132AQ24JP5 1023 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms