RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 RARGP13631 454 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 TCF3P15923 654 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 CLCN1P35523 988 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 GPD2P43304 727 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 IFNAR2P48551 515 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 RGS7P49802 495 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 KPNA1P52294 538 aaPredicted RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 MLLT6P55198 1093 aaPredicted RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 YWHAGP61981 247 aaKnown RBP eCLIP8.64□□□□□ -1.03
PNKP-226ENST00000636840 FANCCQ00597 558 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 FCHO2Q0JRZ9 810 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 GRM2Q14416 872 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 PDGFRLQ15198 375 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 RAB41Q5JT25 222 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 C10orf120Q5SQS8 335 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 PM20D1Q6GTS8 502 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 KLHDC10Q6PID8 442 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 VITQ6UXI7 678 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 SCML4Q8N228 414 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 TMEM35BQ8NCS4 154 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 ST13P5Q8NFI4 369 aaPredicted RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 IRGQQ8WZA9 623 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 USP13Q92995 863 aaPredicted RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 SECISBP2LQ93073 1101 aaKnown RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 MSANTD3Q96H12 275 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 NAA15Q9BXJ9 866 aaKnown RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 PLA2G2FQ9BZM2 168 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 ULBP1Q9BZM6 244 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 EDEM3Q9BZQ6 932 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 DCLK3Q9C098 648 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 LHX5Q9H2C1 402 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 SYNCQ9H7C4 482 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 C8orf33Q9H7E9 229 aaPredicted RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 ABCC13Q9NSE7 274 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 DNMT3LQ9UJW3 386 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 ARHGAP26Q9UNA1 814 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 SIK3Q9Y2K2 1263 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 CPQQ9Y646 472 aa8.64□□□□□ -1.03
PNKP-226ENST00000636840 ZNF638Q14966 1978 aaKnown RBP8.64□□□□□ -1.03
PNKP-226ENST00000636840 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 A0A1W2PQH9 124 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 E2F8A0AVK6 867 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 F8VZ95 297 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 LEFTY2O00292 366 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 CAPN9O14815 690 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 TEX33O43247 280 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 COCHO43405 550 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 NARSO43776 548 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 TADA3O75528 432 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 GFPT2O94808 682 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 NFATC1O95644 943 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 OAS1P00973 400 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 TPM1P09493 284 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 FERP16591 822 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 FCARP24071 287 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 SOX5P35711 763 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 APBA1Q02410 837 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 ADIGQ0VDE8 80 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 RUNX3Q13761 415 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 MTF1Q14872 753 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 NR1I3Q14994 352 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 MLF2Q15773 248 aaPredicted RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 ITPRIPL2Q3MIP1 535 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 EFHC1Q5JVL4 640 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 PMF1Q6P1K2 205 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 ZNF852Q6ZMS4 543 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 GPRIN1Q7Z2K8 1008 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 SIX5Q8N196 739 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.03
PNKP-226ENST00000636840 ATP2A3Q93084 1043 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 FAM149B1Q96BN6 582 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 OTUB2Q96DC9 234 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 PPP1R13BQ96KQ4 1090 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 RNF38Q9H0F5 515 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 GANQ9H2C0 597 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 HSD3B7Q9H2F3 369 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 CCSER2Q9H7U1 834 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
PNKP-226ENST00000636840 DUS2Q9NX74 493 aaKnown RBP8.63□□□□□ -1.03
PNKP-226ENST00000636840 CA14Q9ULX7 337 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 MYO6Q9UM54 1294 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 ZNF510Q9Y2H8 683 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 DENND4AQ7Z401 1863 aa8.63□□□□□ -1.03
PNKP-226ENST00000636840 PTPRDP23468 1912 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 TULP2O00295 520 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 PRAMEF12O95522 483 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 CALCAP01258 141 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 LTFP02788 710 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 CYP11B1P15538 503 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 KLK7P49862 253 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 CLCN5P51795 746 aa8.62□□□□□ -1.03
PNKP-226ENST00000636840 DAOAP59103 153 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms