RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 HALP42357 657 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC1A1P43005 524 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CACNB3P54284 484 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CDH13P55290 713 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 RPS6P62753 249 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 INTS6LQ5JSJ4 861 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CYP20A1Q6UW02 462 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 THAP5Q7Z6K1 395 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SRBD1Q8N5C6 995 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF557Q8N988 423 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EEF1AKMT1Q8WVE0 214 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CENPIQ92674 756 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PROX1Q92786 737 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TMEM169Q96HH4 297 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 Q96MT0 163 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 MEIS3Q99687 375 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CLPBQ9H078 707 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF302Q9NR11 478 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 POLR3EQ9NVU0 708 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 KCNJ14Q9UNX9 436 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 BAIAP2Q9UQB8 552 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CHKBQ9Y259 395 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 LRCH1Q9Y2L9 728 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 UHRF1BP1LA0JNW5 1464 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SH3D21A4FU49 640 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TTLL8A6PVC2 850 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 FDX1P10109 184 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CYP2D6P10635 497 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 RARBP10826 455 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TPP2P29144 1249 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 QARSP47897 775 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CWF19L1Q69YN2 538 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PRMT9Q6P2P2 845 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPAG16Q8N0X2 631 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 OR2L5Q8NG80 312 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 BDH2Q9BUT1 245 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPATA5L1Q9BVQ7 753 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DPY30Q9C005 99 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TASP1Q9H6P5 420 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ETNK1Q9HBU6 452 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PNPLA8Q9NP80 782 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SAMD4AQ9UPU9 718 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CASZ1Q86V15 1759 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 LOC110117498-PIK3R3F6TDL0 507 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 NDUFA10O95299 355 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 MOCS2O96007 188 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 RLN1P04808 185 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PRG2P13727 222 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC26A3P40879 764 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 COLEC12Q5KU26 742 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 MRNIPQ6NTE8 343 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SDR16C5Q8N3Y7 309 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 OR5T3Q8NGG3 340 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 IPCEF1Q8WWN9 437 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PIK3R3Q92569 461 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DDX17Q92841 729 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 BTBD9Q96Q07 612 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC24A3Q9HC58 644 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EMC3Q9P0I2 261 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TRIM49BA6NDI0 452 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TTC34A8MYJ7 566 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TRIM49D1C9J1S8 452 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L12C9JPN9 530 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L21D6R901 530 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 M0R129 80 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 MDM4O15151 490 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ATG7O95352 703 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 GSPT1P15170 499 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ETF1P62495 437 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DSG1Q02413 1049 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC39A6Q13433 755 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ANO7Q6IWH7 933 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 FIP1L1Q6UN15 594 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 GALNT7Q86SF2 657 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EID3Q8N140 333 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 FANCBQ8NB91 859 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 KIF12Q96FN5 646 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 NEDD4LQ96PU5 975 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 OSGEPL1Q9H4B0 414 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DNAJC28Q9NX36 388 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CMTM6Q9NX76 183 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ING4Q9UNL4 249 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 INVSQ9Y283 1065 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 AP3M1Q9Y2T2 418 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TIMM8BQ9Y5J9 83 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 KPNA4O00629 521 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GCATO75600 419 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ANXA9O76027 345 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GARTP22102 1010 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ECHS1P30084 290 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 BTDP43251 543 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SARSP49591 514 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 HSF2Q03933 536 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MTFR2Q6P444 385 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms