RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 RHPN2P1A8MT19 583 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 H7C4K7 107 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 RAB27BO00194 218 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 DSCR3O14972 297 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 IL18RAPO95256 599 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 MT-ND5P03915 603 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 A1BGP04217 495 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 CYP2D6P10635 497 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 RENBPP51606 427 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 DGKQP52824 942 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 DAG1Q14118 895 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 TRIP6Q15654 476 aaKnown RBP3.97□□□□□ -1.77
SRP54-214ENST00000630962 LY6KQ17RY6 165 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 LRCH2Q5VUJ6 765 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 PLAG1Q6DJT9 500 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 FCRL6Q6DN72 434 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 SLC18B1Q6NT16 456 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 TMEM65Q6PI78 240 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 C1QL2Q7Z5L3 287 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 SESTD1Q86VW0 696 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 FMNL3Q8IVF7 1028 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 C8orf58Q8NAV2 365 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 CCDC150Q8NCX0 1101 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 PIGOQ8TEQ8 1089 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 CUL5Q93034 780 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 IQCDQ96DY2 449 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 C8orf48Q96LL4 319 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 FAM227BQ96M60 508 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 HS6ST2Q96MM7 605 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 HIST1H2AAQ96QV6 131 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 DDX21Q9NR30 783 aaKnown RBP eCLIP3.97□□□□□ -1.77
SRP54-214ENST00000630962 DDX20Q9UHI6 824 aaKnown RBP3.97□□□□□ -1.77
SRP54-214ENST00000630962 MID2Q9UJV3 735 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 WDR17Q8IZU2 1322 aa3.96□□□□□ -1.77
SRP54-214ENST00000630962 SETD1BQ9UPS6 1966 aaKnown RBP3.96□□□□□ -1.77
SRP54-214ENST00000630962 CLCA1A8K7I4 914 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 H3BNC9 293 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 EXOC5O00471 708 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 AREL1O15033 823 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 ADRA1DP25100 572 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 RBL1P28749 1068 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 MMP13P45452 471 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 ZNF81P51508 661 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 TXNL4AP83876 142 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 CFHR3Q02985 330 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 IFIT5Q13325 482 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 RNASE12Q5GAN4 147 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 PXDC1Q5TGL8 231 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 UNC13DQ70J99 1090 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 KRT28Q7Z3Y7 464 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 BCDIN3DQ7Z5W3 292 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 YTHDF3Q7Z739 585 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 C14orf80Q86SX3 495 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 C12orf76Q8N812 135 aaPredicted RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 PNPLA1Q8N8W4 532 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 PRSS3P2Q8NHM4 247 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 TSR2Q969E8 191 aaKnown RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 RITA1Q96K30 269 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 MMS19Q96T76 1030 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 CINPQ9BW66 212 aaPredicted RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 COLEC11Q9BWP8 271 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 PRSS22Q9GZN4 317 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 ZBTB26Q9HCK0 441 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 HEYLQ9NQ87 328 aaPredicted RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 TUBA8Q9NY65 449 aaPredicted RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 TMOD4Q9NZQ9 345 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 BTBD3Q9Y2F9 522 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 TBC1D30Q9Y2I9 924 aa3.96□□□□□ -1.78
SRP54-214ENST00000630962 FNDC1Q4ZHG4 1894 aaPredicted RBP3.96□□□□□ -1.78
SRP54-214ENST00000630962 FER1L4A9Z1Z3 1794 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 COL15A1P39059 1388 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 CCNT2O60583 730 aaKnown RBP3.95□□□□□ -1.78
SRP54-214ENST00000630962 PDE8BO95263 885 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 ERBB2P04626 1255 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 CYP2A6P11509 494 aaPredicted RBP3.95□□□□□ -1.78
SRP54-214ENST00000630962 IL1R1P14778 569 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 EIF4A1P60842 406 aaKnown RBP3.95□□□□□ -1.78
SRP54-214ENST00000630962 LMAN2Q12907 356 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 STK3Q13188 491 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 LAMB3Q13751 1172 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 LARS2Q15031 903 aaKnown RBP3.95□□□□□ -1.78
SRP54-214ENST00000630962 LINC01465Q8N7H1 131 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 FAM71DQ8N9W8 422 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 MBD3L2Q8NHZ7 208 aaPredicted RBP3.95□□□□□ -1.78
SRP54-214ENST00000630962 ABHD5Q8WTS1 349 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 DDB2Q92466 427 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 PMM1Q92871 262 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 CTHRC1Q96CG8 243 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 HIC2Q96JB3 615 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 C5orf34Q96MH7 638 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 KLHL42Q9P2K6 505 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 SPATA31A1Q5TZJ5 1347 aa3.95□□□□□ -1.78
SRP54-214ENST00000630962 TCRBV5S1A1TA0A578 114 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 WDR91A4D1P6 747 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 PQBP1O60828 265 aaKnown RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 COQ9O75208 318 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 VNN1O95497 513 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 TMEM225BP0DP42 221 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms