RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C12orf56Q8IXR9 622 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 SMARCD1Q96GM5 515 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 TNIP3Q96KP6 325 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 DMAP1Q9NPF5 467 aaPredicted RBP20.11■□□□□ 0.81
SMN2-215ENST00000628696 FAM13BQ9NYF5 915 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 CEP192Q8TEP8 1941 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 CDX4O14627 284 aaPredicted RBP20.1■□□□□ 0.81
SMN2-215ENST00000628696 ADAM23O75077 832 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 ORC1Q13415 861 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 NCOA4Q13772 614 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 BYSLQ13895 437 aaKnown RBP20.1■□□□□ 0.81
SMN2-215ENST00000628696 TRIM61Q5EBN2 209 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 OTUB2Q96DC9 234 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 ZFRQ96KR1 1074 aaKnown RBP20.1■□□□□ 0.81
SMN2-215ENST00000628696 SDCBP2Q9H190 292 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 VRTNQ9H8Y1 702 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 KRT82Q9NSB4 513 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 DEC1Q9P2X7 70 aa20.1■□□□□ 0.81
SMN2-215ENST00000628696 MBD1Q9UIS9 605 aaPredicted RBP20.1■□□□□ 0.81
SMN2-215ENST00000628696 PVALEFA0A1B0GWK0 134 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 LRRIQ3A6PVS8 624 aaPredicted RBP20.09■□□□□ 0.81
SMN2-215ENST00000628696 TNFRSF10BO14763 440 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 TULP3O75386 442 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 CHRM1P11229 460 aaPredicted RBP20.09■□□□□ 0.81
SMN2-215ENST00000628696 PTGER3P43115 390 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 ME1P48163 572 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 AP3M2P53677 418 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 SNX30Q5VWJ9 437 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 TMEM25Q86YD3 366 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 FUKQ8N0W3 1084 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 PHTF2Q8N3S3 785 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 ZNF513Q8N8E2 541 aaPredicted RBP20.09■□□□□ 0.81
SMN2-215ENST00000628696 GOLGA5Q8TBA6 731 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 PARD3BQ8TEW8 1205 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 WBP2Q969T9 261 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 NUSAP1Q9BXS6 441 aaKnown RBP20.09■□□□□ 0.81
SMN2-215ENST00000628696 SPHK2Q9NRA0 654 aa20.09■□□□□ 0.81
SMN2-215ENST00000628696 TNRC6BQ9UPQ9 1833 aaKnown RBP20.09■□□□□ 0.81
SMN2-215ENST00000628696 C4BPAP04003 597 aaKnown RBP20.08■□□□□ 0.81
SMN2-215ENST00000628696 CCDC130P13994 396 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 WASP42768 502 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 MAPK8P45983 427 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 LMAN2Q12907 356 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 MAP7D1Q3KQU3 841 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 PREPLQ4J6C6 727 aaPredicted RBP20.08■□□□□ 0.81
SMN2-215ENST00000628696 C10orf76Q5T2E6 689 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 NUDT18Q6ZVK8 323 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 SYT12Q8IV01 421 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 DEFB119Q8N690 84 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 DEFB124Q8NES8 71 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 TMEM74BQ9NUR3 256 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 COMMD8Q9NX08 183 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 IL37Q9NZH6 218 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 EVLQ9UI08 416 aaPredicted RBP20.08■□□□□ 0.81
SMN2-215ENST00000628696 PCDHA7Q9UN72 937 aa20.08■□□□□ 0.81
SMN2-215ENST00000628696 ADAMTS9Q9P2N4 1935 aa20.08■□□□□ 0.8
SMN2-215ENST00000628696 PLXND1Q9Y4D7 1925 aa20.08■□□□□ 0.8
SMN2-215ENST00000628696 ATXN2Q99700 1313 aaKnown RBP20.07■□□□□ 0.8
SMN2-215ENST00000628696 HOXC11O43248 304 aaPredicted RBP20.07■□□□□ 0.8
SMN2-215ENST00000628696 BEST1O76090 585 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 VNN1O95497 513 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 ZDHHC11BP0C7U3 371 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 P4HA1P13674 534 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 CEACAM1P13688 526 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 SPINK2P20155 84 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 TUBP50607 506 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 MAP3K7CLP57077 242 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 LYSMD4Q5XG99 296 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 TRMT11Q7Z4G4 463 aaKnown RBP20.07■□□□□ 0.8
SMN2-215ENST00000628696 ETFBKMTQ8IXQ9 262 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 CEP57L1Q8IYX8 460 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 SMOQ99835 787 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 SERTAD1Q9UHV2 236 aa20.07■□□□□ 0.8
SMN2-215ENST00000628696 TRIM24O15164 1050 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 TLR5O60602 858 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 PROS1P07225 676 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 CSRP1P21291 193 aaKnown RBP20.06■□□□□ 0.8
SMN2-215ENST00000628696 PGFP49763 221 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 NDST1P52848 882 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 DLG4P78352 724 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 SGSM1Q2NKQ1 1148 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 RESP18Q5W5W9 173 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 TERB1Q8NA31 727 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 ZMIZ2Q8NF64 920 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 KCNV2Q8TDN2 545 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 ERLEC1Q96DZ1 483 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 CEP295Q9C0D2 2601 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 FBXO44Q9H4M3 255 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMN2-215ENST00000628696 TLR8Q9NR97 1041 aaKnown RBP20.06■□□□□ 0.8
SMN2-215ENST00000628696 FAM49BQ9NUQ9 324 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 EXOC1Q9NV70 894 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 DNAJC17Q9NVM6 304 aaKnown RBP20.06■□□□□ 0.8
SMN2-215ENST00000628696 HMGXB4Q9UGU5 601 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 PCNX2A6NKB5 2137 aa20.06■□□□□ 0.8
SMN2-215ENST00000628696 FAM92AA1XBS5 289 aa20.05■□□□□ 0.8
SMN2-215ENST00000628696 C1QTNF9BB2RNN3 333 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms