RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 VRTNQ9H8Y1 702 aa5.89□□□□□ -1.47
EBF1-211ENST00000622875 CLK4Q9HAZ1 481 aaKnown RBP5.89□□□□□ -1.47
EBF1-211ENST00000622875 STOML2Q9UJZ1 356 aa5.89□□□□□ -1.47
EBF1-211ENST00000622875 EDARQ9UNE0 448 aa5.89□□□□□ -1.47
EBF1-211ENST00000622875 MTF2Q9Y483 593 aaPredicted RBP5.89□□□□□ -1.47
EBF1-211ENST00000622875 RIPK3Q9Y572 518 aa5.89□□□□□ -1.47
EBF1-211ENST00000622875 C9IYK1 514 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 STX16-NPEPL1H3BU86 382 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 RAD51BO15315 384 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SEC24DO94855 1032 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 DNAJA1P31689 397 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 SLC16A2P36021 539 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ZNF165P49910 485 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 UAP1Q16222 522 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 ANKRD20A8PQ5CZ79 823 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 RARS2Q5T160 578 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 GALNT17Q6IS24 598 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 KANK3Q6NY19 840 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 KDELC1Q6UW63 502 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ZNF598Q86UK7 904 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 CSGALNACT2Q8N6G5 542 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SH3RF3Q8TEJ3 882 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 PSMG3-AS1Q96PY0 264 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 C6orf62Q9GZU0 229 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 SLC32A1Q9H598 525 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PARVAQ9NVD7 372 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SHMT1P34896 483 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 MTX1Q13505 466 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 UBAP2LQ14157 1087 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 PLEKHG6Q3KR16 790 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PKDCCQ504Y2 493 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PRR16Q569H4 304 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 FSCBQ5H9T9 825 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SPDYCQ5MJ68 293 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 C10orf62Q5T681 223 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 ATAD3BQ5T9A4 648 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 DENND2CQ68D51 928 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CDCA2Q69YH5 1023 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 FCRLBQ6BAA4 426 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 KIAA1211LQ6NV74 962 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CCDC25Q86WR0 208 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 TRIM69Q86WT6 500 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PGBD1Q96JS3 809 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CCDC90BQ9GZT6 254 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 VPS11Q9H270 941 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ARMC1Q9NVT9 282 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 GIN1Q9NXP7 522 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ARL2BPQ9Y2Y0 163 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PCDHB12Q9Y5F1 795 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ZFP37Q9Y6Q3 630 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 V9GYQ6 96 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PDCD11Q14690 1871 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 ATG2BQ96BY7 2078 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 LRRIQ4A6NIV6 560 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 C4orf47A7E2U8 309 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 KPNA4O00629 521 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 SMNDC1O75940 238 aaKnown RBP eCLIP5.88□□□□□ -1.47
EBF1-211ENST00000622875 CDK17Q00537 523 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 ARMC4Q5T2S8 1044 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ANO5Q75V66 913 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CAMK1DQ8IU85 385 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CCDC116Q8IYX3 515 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 GRK7Q8WTQ7 553 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 LPIN3Q9BQK8 851 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CAB39LQ9H9S4 337 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ITPR3Q14573 2671 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SPTAN1Q13813 2472 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 KLHL41O60662 606 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 N4BP1O75113 896 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 FGF18O76093 207 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ATG7O95352 703 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 ANP32DO95626 131 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PSMA2P25787 234 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CSTF2P33240 577 aaKnown RBP eCLIP5.88□□□□□ -1.47
EBF1-211ENST00000622875 IL12RB1P42701 662 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PEX5P50542 639 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 NUP107P57740 925 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 RIPK1Q13546 671 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 TAF12Q16514 161 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SGSM1Q2NKQ1 1148 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 C4orf50Q6ZRC1 276 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 EPS8L3Q8TE67 593 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 KLHL29Q96CT2 875 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 PGBD4Q96DM1 585 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 FRMD6Q96NE9 622 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 CNPY3Q9BT09 278 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 EFHD1Q9BUP0 239 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 KATNAL1Q9BW62 490 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 XAB2Q9HCS7 855 aaKnown RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 CCDC177Q9NQR7 707 aaPredicted RBP5.88□□□□□ -1.47
EBF1-211ENST00000622875 MID2Q9UJV3 735 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SOX13Q9UN79 622 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 SESN1Q9Y6P5 492 aa5.88□□□□□ -1.47
EBF1-211ENST00000622875 MTCL1Q9Y4B5 1905 aaKnown RBP5.87□□□□□ -1.47
EBF1-211ENST00000622875 FRMPD4Q14CM0 1322 aa5.87□□□□□ -1.47
EBF1-211ENST00000622875 PIK3CDO00329 1044 aa5.87□□□□□ -1.47
EBF1-211ENST00000622875 APAF1O14727 1248 aa5.87□□□□□ -1.47
EBF1-211ENST00000622875 DTNBO60941 627 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms