RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 SETSIPP0DME0 302 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 KRT5P13647 590 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 MRE11P49959 708 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 CSTF1Q05048 431 aaKnown RBP12.99□□□□□ -0.33
CBWD3-218ENST00000622755 GOLGA7BQ2TAP0 167 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 BTBD8Q5XKL5 378 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 RSRC2Q7L4I2 434 aaKnown RBP12.99□□□□□ -0.33
CBWD3-218ENST00000622755 CCDC186Q7Z3E2 898 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 ALYREFQ86V81 257 aaKnown RBP12.99□□□□□ -0.33
CBWD3-218ENST00000622755 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 ATRIPQ8WXE1 791 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 CD101Q93033 1021 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
CBWD3-218ENST00000622755 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
CBWD3-218ENST00000622755 XPO1O14980 1071 aaKnown RBP12.98□□□□□ -0.33
CBWD3-218ENST00000622755 ARSAP15289 507 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 NBL1P41271 181 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 CXCL12P48061 93 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 KIF11P52732 1056 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 MAN2A1Q16706 1144 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 EML3Q32P44 896 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 CCSER2Q9H7U1 834 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 HPS4Q9NQG7 708 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
CBWD3-218ENST00000622755 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 TRDMT1O14717 391 aaKnown RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 CYP26A1O43174 497 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 ZDHHC11BP0C7U3 371 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 SP9P0CG40 484 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 IRF1P10914 325 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 CHRNB1P11230 501 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 RARGP13631 454 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 GJA4P35212 333 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 PLA2G4AP47712 749 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 COG7P83436 770 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 MTAPQ13126 283 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 EXOC3L4Q17RC7 722 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 PIGZQ86VD9 579 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 SECISBP2LQ93073 1101 aaKnown RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
CBWD3-218ENST00000622755 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
CBWD3-218ENST00000622755 A0A1W2PQH9 124 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 PROB1E7EW31 1015 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 M0QYV0 167 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 GFRA3O60609 400 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 USP8P40818 1118 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 TKTL1P51854 596 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 GAD2Q05329 585 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 ACDQ96AP0 544 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.33
CBWD3-218ENST00000622755 HHLA1C9JL84 531 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.34
CBWD3-218ENST00000622755 ZBED1O96006 694 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 ADH5P11766 374 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.34
CBWD3-218ENST00000622755 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.34
CBWD3-218ENST00000622755 SNX16P57768 344 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.34
CBWD3-218ENST00000622755 PDE4CQ08493 712 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 CNGA2Q16280 664 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 SMYD5Q6GMV2 418 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 GPRIN1Q7Z2K8 1008 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 ZNF276Q8N554 614 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 HINFPQ9BQA5 517 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 TUBGCP2Q9BSJ2 902 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.34
CBWD3-218ENST00000622755 APEX2Q9UBZ4 518 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 CEP83Q9Y592 693 aa12.96□□□□□ -0.34
CBWD3-218ENST00000622755 USP3Q9Y6I4 520 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms